Cadherin 3D structures
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 7: | Line 7: | ||
**[[6cxy]] – hCDH1 + antibody - human<br /> | **[[6cxy]] – hCDH1 + antibody - human<br /> | ||
| + | **[[8h62]] – hCDH1 EC12 + internalin A<br /> | ||
* CDH5 | * CDH5 | ||
| Line 32: | Line 33: | ||
*CDH encoded by CDH17 | *CDH encoded by CDH17 | ||
| - | **[[6ulm]] – hCDH17 EC1-EC2<br /> | + | **[[6ulm]], [[7ev1]] – hCDH17 EC1-EC2<br /> |
| + | **[[7cym]] – hCDH17 EC1-EC4<br /> | ||
* CDH20 | * CDH20 | ||
| Line 54: | Line 56: | ||
**[[5tfm]] - mCDH23 EC6-EC8<br /> | **[[5tfm]] - mCDH23 EC6-EC8<br /> | ||
**[[5tfl]] - mCDH23 EC7-EC8<br /> | **[[5tfl]] - mCDH23 EC7-EC8<br /> | ||
| + | **[[7uqu]] - mCDH23 EC9<br /> | ||
| + | **[[7t3s]] - mCDH23 EC8-EC9<br /> | ||
**[[5vh2]] - mCDH23 EC12-EC13 (mutant)<br /> | **[[5vh2]] - mCDH23 EC12-EC13 (mutant)<br /> | ||
| + | **[[7u71]] - mCDH23 EC13-EC15<br /> | ||
| + | **[[7skh]] - mCDH23 EC16-EC17<br /> | ||
**[[5wjm]] - mCDH23 EC17-EC18<br /> | **[[5wjm]] - mCDH23 EC17-EC18<br /> | ||
| + | **[[7t80]] - mCDH23 EC18-EC19<br /> | ||
**[[5tfk]] - mCDH23 EC19-EC21<br /> | **[[5tfk]] - mCDH23 EC19-EC21<br /> | ||
**[[5i8d]], [[5ulu]], [[5un2]] - mCDH23 EC19-EC21 (mutant)<br /> | **[[5i8d]], [[5ulu]], [[5un2]] - mCDH23 EC19-EC21 (mutant)<br /> | ||
**[[5uz8]] - mCDH23 EC22-EC24<br /> | **[[5uz8]] - mCDH23 EC22-EC24<br /> | ||
**[[5vt8]] - mCDH23 EC23-EC25<br /> | **[[5vt8]] - mCDH23 EC23-EC25<br /> | ||
| + | **[[7suu]] - mCDH23 EC25-EC26<br /> | ||
| + | **[[8tri]] - mCDH23 EC25 + MAD28<br /> | ||
**[[4apx]], [[4aq8]], [[4axw]], [[4xxw]] - mCDH23 EC1-EC2 + Prot-CDH15<br /> | **[[4apx]], [[4aq8]], [[4axw]], [[4xxw]] - mCDH23 EC1-EC2 + Prot-CDH15<br /> | ||
**[[4aqa]], [[4aqe]] - mCDH23 EC1-EC2 (mutant) + Prot-CDH15<br /> | **[[4aqa]], [[4aqe]] - mCDH23 EC1-EC2 (mutant) + Prot-CDH15<br /> | ||
| + | **[[7n4p]] – CDH23 EC1-EC2 - lizard<br /> | ||
| + | **[[7sgx]] – CDH23 EC1-EC2 - turtle<br /> | ||
| + | **[[7sb6]], [[7scm]] – CDH23 EC1-EC2 - synthetic<br /> | ||
**[[5w4t]] - CDH23 EC1-EC3 - zebrafish<br /> | **[[5w4t]] - CDH23 EC1-EC3 - zebrafish<br /> | ||
| + | **[[8e51]] – CDH23 EC1-EC2 + Prot-CDH15 EC1-EC2 - catfish<br /> | ||
* C-CDH “classical” | * C-CDH “classical” | ||
| Line 68: | Line 81: | ||
**[[1l3w]] – XlC-CDH ectodomain - ''Xenopus laevis''<br /> | **[[1l3w]] – XlC-CDH ectodomain - ''Xenopus laevis''<br /> | ||
**[[1q5b]], [[1q5c]], [[1q55]], [[1q5a]] – C-CDH model into desmosome – electron tomography<br /> | **[[1q5b]], [[1q5c]], [[1q55]], [[1q5a]] – C-CDH model into desmosome – electron tomography<br /> | ||
| + | **[[7tni]] - CDH23 EC12 (mutant) – tobacco moth<br /> | ||
* E-CDH epithelial or CDH1 | * E-CDH epithelial or CDH1 | ||
| Line 74: | Line 88: | ||
**[[4zte]] – hE-CDH EC1-EC2 + inhibitor<br /> | **[[4zte]] – hE-CDH EC1-EC2 + inhibitor<br /> | ||
**[[6fek]], [[6vel]] – hE-CDH EC1-EC2 + antibody<br /> | **[[6fek]], [[6vel]] – hE-CDH EC1-EC2 + antibody<br /> | ||
| + | **[[7stz]] – hE-CDH EC1-EC5 + antibody<br /> | ||
**[[3ifq]] – hE-CDH EC1-EC3 <br /> | **[[3ifq]] – hE-CDH EC1-EC3 <br /> | ||
**[[3ff7]], [[3ff8]] - hE-CDH EC1-EC3+NK cell receptor<br /> | **[[3ff7]], [[3ff8]] - hE-CDH EC1-EC3+NK cell receptor<br /> | ||
| Line 115: | Line 130: | ||
*P-CDH placental or CDH3 | *P-CDH placental or CDH3 | ||
| - | **[[4oy9]], [[4zml]], [[4zmn]], [[4zmq]], [[4zmt]], [[4zmw]], [[4zmz]], [[6ztb]] – hP-CDH EC1-EC2<br /> | + | **[[4oy9]], [[4zml]], [[4zmn]], [[4zmq]], [[4zmt]], [[4zmw]], [[4zmz]], [[6ztb]] – hP-CDH EC1-EC2 residues 108-324<br /> |
**[[4zmo]], [[4zmp]], [[4zmv]], [[4zmx]], [[4zmy]] – hP-CDH EC1-EC2 (mutant)<br /> | **[[4zmo]], [[4zmp]], [[4zmv]], [[4zmx]], [[4zmy]] – hP-CDH EC1-EC2 (mutant)<br /> | ||
**[[5jyl]], [[5jym]] – hP-CDH EC1-EC2 + SCFV TSP7<br /> | **[[5jyl]], [[5jym]] – hP-CDH EC1-EC2 + SCFV TSP7<br /> | ||
**[[6ztr]] – hP-CDH EC1-EC2 + antibody<br /> | **[[6ztr]] – hP-CDH EC1-EC2 + antibody<br /> | ||
| + | **[[7cme]], [[7cmf]], [[8hyi]] – hP-CDH EC1-EC2 + inhibitor<br /> | ||
**[[4nqq]] – mP-CDH EC1-EC2<br /> | **[[4nqq]] – mP-CDH EC1-EC2<br /> | ||
| Line 140: | Line 156: | ||
**[[6e8f]] - hProt-CDH15 EC3-EC5<br /> | **[[6e8f]] - hProt-CDH15 EC3-EC5<br /> | ||
**[[5t4n]] - hProt-CDH15 EC3-EC5 (mutant) <br /> | **[[5t4n]] - hProt-CDH15 EC3-EC5 (mutant) <br /> | ||
| + | **[[8egx]] - hProt-CDH16 EC1-EC4 + hProt-CDHFAT 4 EC1-EC4<br /> | ||
| + | **[[8egw]] - hProt-CDH16 EC1-EC3 + hProt-CDHFAT 4 EC1-EC4<br /> | ||
**[[6vft]] - hProt-CDH17 EC1-EC4 <br /> | **[[6vft]] - hProt-CDH17 EC1-EC4 <br /> | ||
**[[6vfr]] - hProt-CDH18 EC1-EC4 <br /> | **[[6vfr]] - hProt-CDH18 EC1-EC4 <br /> | ||
**[[6vfu]] - hProt-CDH19 EC1-EC4 <br /> | **[[6vfu]] - hProt-CDH19 EC1-EC4 <br /> | ||
| + | **[[7n86]] - hProt-CDH24 EC1-EC2 <br /> | ||
**[[6meq]], [[6mer]] - hProt-CDH1 g B3 EC1-EC4 <br /> | **[[6meq]], [[6mer]] - hProt-CDH1 g B3 EC1-EC4 <br /> | ||
**[[6c13]] - mProt-CDH15 – Cryo EM<br /> | **[[6c13]] - mProt-CDH15 – Cryo EM<br /> | ||
| Line 157: | Line 176: | ||
**[[6e6b]] - mProt-CDH γ B4 EC domain<br /> | **[[6e6b]] - mProt-CDH γ B4 EC domain<br /> | ||
**[[5v5x]] - mProt-CDH γ B7 EC3-EC6<br /> | **[[5v5x]] - mProt-CDH γ B7 EC3-EC6<br /> | ||
| + | **[[7jgz]], [[7rgf]] - mProt-CDH gamma C4 EC1-EC4<br /> | ||
**[[6vg1]] - Prot-CDH 8.1 EC1-EC6 - frog<br /> | **[[6vg1]] - Prot-CDH 8.1 EC1-EC6 - frog<br /> | ||
**[[6pgw]] - zProt-CDH19 EC3-EC6 <br /> | **[[6pgw]] - zProt-CDH19 EC3-EC6 <br /> | ||
| Line 166: | Line 186: | ||
**[[5eqx]] – hDes-3 ectodomain<br /> | **[[5eqx]] – hDes-3 ectodomain<br /> | ||
**[[6sit]] – hDes2 EC2-EC3 149-386 + adenovirus fiber protein <br /> | **[[6sit]] – hDes2 EC2-EC3 149-386 + adenovirus fiber protein <br /> | ||
| - | **[[6qnt]], [[6qnu]], [[7agf]], [[7agg]] – | + | **[[6qnt]], [[6qnu]], [[8qjx]], [[8qjy]] – hDes-2 ectodomain + adenovirus fiber protein – Cryo EM<br /> |
| + | **[[8qk3]] – hDes-2 ectodomain + adenovirus fiber protein + CD46 – Cryo EM<br /> | ||
| + | **[[7agf]], [[7agg]] – hDes-2 EC2-EC3 + adenovirus fiber protein – Cryo EM<br /> | ||
**[[7a7d]] – hDes-2 + desmocollin-2 – Cryo EM<br /> | **[[7a7d]] – hDes-2 + desmocollin-2 – Cryo EM<br /> | ||
Current revision
3D Structures of Cadherin
Updated on 25-December-2024
