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| ==NMR solution structure of apo-MptpA== | | ==NMR solution structure of apo-MptpA== |
- | <StructureSection load='2luo' size='340' side='right'caption='[[2luo]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2luo' size='340' side='right'caption='[[2luo]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2luo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LUO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LUO FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2luo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LUO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LUO FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1u2p|1u2p]], [[1u2q|1u2q]]</div></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ptpA, Rv2234, MT2293, MTCY427.15 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
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- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr>
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| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2luo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2luo OCA], [https://pdbe.org/2luo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2luo RCSB], [https://www.ebi.ac.uk/pdbsum/2luo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2luo ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2luo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2luo OCA], [https://pdbe.org/2luo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2luo RCSB], [https://www.ebi.ac.uk/pdbsum/2luo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2luo ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[https://www.uniprot.org/uniprot/PTPA_MYCTU PTPA_MYCTU]] Mediates host-pathogen interaction and interferes with vesicular trafficking in the infected macrophage. Inhibits host phagolysosomal fusion in M.tuberculosis-infected macrophages to promote bacteria survival. Dephosphorylates host VPS33B protein, which induces a block of the host phagosome maturation within macrophage cells. Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates.
| + | [https://www.uniprot.org/uniprot/PTPA_MYCTU PTPA_MYCTU] Mediates host-pathogen interaction and interferes with vesicular trafficking in the infected macrophage. Inhibits host phagolysosomal fusion in M.tuberculosis-infected macrophages to promote bacteria survival. Dephosphorylates host VPS33B protein, which induces a block of the host phagosome maturation within macrophage cells. Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Protein-tyrosine-phosphatase]] | + | [[Category: Mycobacterium tuberculosis]] |
- | [[Category: Jonker, H R.A]] | + | [[Category: Jonker HRA]] |
- | [[Category: Loehr, F]] | + | [[Category: Loehr F]] |
- | [[Category: Richter, C]] | + | [[Category: Richter C]] |
- | [[Category: Saxena, K]] | + | [[Category: Saxena K]] |
- | [[Category: Schwalbe, H]] | + | [[Category: Schwalbe H]] |
- | [[Category: Sreeramulu, S]] | + | [[Category: Sreeramulu S]] |
- | [[Category: Stehle, T]] | + | [[Category: Stehle T]] |
- | [[Category: Hydrolase]]
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- | [[Category: Low molecular weight tyrosine phosphatase]]
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- | [[Category: Mptpa]]
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| Structural highlights
Function
PTPA_MYCTU Mediates host-pathogen interaction and interferes with vesicular trafficking in the infected macrophage. Inhibits host phagolysosomal fusion in M.tuberculosis-infected macrophages to promote bacteria survival. Dephosphorylates host VPS33B protein, which induces a block of the host phagosome maturation within macrophage cells. Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates.
Publication Abstract from PubMed
Protein tyrosine phosphatases and kinases (PTPs and PTKs) co-regulate cellular processes. In pathogenic bacteria, they are frequently exploited to act as key virulence factors for human diseases. Mycobacterium tuberculosis (Mtb), the causative organism of tuberculosis (TB), secretes a low-molecular-weight (LMW)-PTP, MptpA, which is required for its survival upon infection of host macrophages. Although there is otherwise no sequence similarity of LMW-PTPs to other classes of PTPs, the phosphate binding loop (P-loop) CX5R and the loop containing a critical aspartic acid residue (D-loop), required for the catalytic activity, are well conserved. In most high-molecular-weight (HMW)-PTPs, ligand binding to the P-loop triggers a large conformational reorientation of the D-loop, in which it moves ~10 A, from an open to a closed conformation. Until now, there have been no ligand-free structures of LMW-PTPs described and hence the dynamics of the D-loop has remained largely unknown for these PTPs. Here, we present a high-resolution solution NMR structure of the free form of the MptpA LMW-PTP. In the absence of ligand and phosphate ions, the D-loop adopts an open conformation. Furthermore, we characterized the binding site of phosphate, a competitive inhibitor of LMW-PTPs, on MptpA and elucidated the involvement of both the P- and D-loop in phosphate binding. Notably, in LMW-PTPs, the phosphorylation status of two well conserved tyrosine residues, typically located in the D-loop, regulates the enzyme activity. PtkA, the kinase complementary to MptpA, phosphorylates these two tyrosine residues in MptpA. We characterized the MptpA-PtkA interaction by NMR spectroscopy to show that both P- and D-loop form part of the binding interface.
The apo-structure of the low-molecular-weight protein tyrosine phosphatase A (MptpA) from Mycobacterium tuberculosis allows for better target-specific drug development.,Stehle T, Sreeramulu S, Lohr F, Richter C, Saxena K, Jonker HR, Schwalbe H J Biol Chem. 2012 Aug 10. PMID:22888002[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Stehle T, Sreeramulu S, Lohr F, Richter C, Saxena K, Jonker HR, Schwalbe H. The apo-structure of the low-molecular-weight protein tyrosine phosphatase A (MptpA) from Mycobacterium tuberculosis allows for better target-specific drug development. J Biol Chem. 2012 Aug 10. PMID:22888002 doi:10.1074/jbc.M112.399261
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