7my7
From Proteopedia
(Difference between revisions)
												
			
			 (New page: '''Unreleased structure'''  The entry 7my7 is ON HOLD   Authors: Peat, T.S., Newman, J.  Description: Se-CrtE N-term His-tag structure Category: Unreleased Structures [[Category: Peat,...)  | 
				|||
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure'''  | ||
| - | + | ==Se-CrtE N-term His-tag structure==  | |
| + | <StructureSection load='7my7' size='340' side='right'caption='[[7my7]], [[Resolution|resolution]] 2.36Å' scene=''>  | ||
| + | == Structural highlights ==  | ||
| + | <table><tr><td colspan='2'>[[7my7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus_PCC_7942_=_FACHB-805 Synechococcus elongatus PCC 7942 = FACHB-805]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7MY7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7MY7 FirstGlance]. <br>  | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.36Å</td></tr>  | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7my7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7my7 OCA], [https://pdbe.org/7my7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7my7 RCSB], [https://www.ebi.ac.uk/pdbsum/7my7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7my7 ProSAT]</span></td></tr>  | ||
| + | </table>  | ||
| + | == Function ==  | ||
| + | [https://www.uniprot.org/uniprot/Q31Q61_SYNE7 Q31Q61_SYNE7]   | ||
| + | <div style="background-color:#fffaf0;">  | ||
| + | == Publication Abstract from PubMed ==  | ||
| + | Cyanobacteria are photosynthetic prokaryotes with strong potential to be used for industrial terpenoid production. However, the key enzymes forming the principal terpenoid building blocks, called short-chain prenyltransferases (SPTs), are insufficiently characterized. Here, we examined SPTs in the model cyanobacteria Synechococcus elongatus sp. PCC 7942 and Synechocystis sp. PCC 6803. Each species has a single putative SPT (SeCrtE and SyCrtE, respectively). Sequence analysis identified these as type-II geranylgeranyl pyrophosphate synthases (GGPPSs) with high homology to GGPPSs found in the plastids of green plants and other photosynthetic organisms. In vitro analysis demonstrated that SyCrtE is multifunctional, producing geranylgeranyl pyrophosphate (GGPP; C20 ) primarily but also significant amounts of farnesyl pyrophosphate (FPP, C15 ) and geranyl pyrophosphate (GPP, C10 ); whereas SeCrtE appears to produce only GGPP. The crystal structures were solved to 2.02 and 1.37 A, respectively, and the superposition of the structures against the GGPPS of Synechococcus elongatus sp. PCC 7002 yield a root mean square deviation of 0.8 A (SeCrtE) and 1.1 A (SyCrtE). We also discovered that SeCrtE is co-encoded in an operon with a functional GGPP phosphatase, suggesting metabolic pairing of these two activities and a putative function in tocopherol biosynthesis. This work sheds light on the activity of SPTs and terpenoid synthesis in cyanobacteria. Understanding native prenyl phosphate metabolism is an important step in developing approaches to engineering the production of different chain-length terpenoids in cyanobacteria.  | ||
| - | + | Molecular characterization of cyanobacterial short-chain prenyltransferases and discovery of a novel GGPP phosphatase.,Satta A, Esquirol L, Ebert BE, Newman J, Peat TS, Plan M, Schenk G, Vickers CE FEBS J. 2022 Jun 15. doi: 10.1111/febs.16556. PMID:35704353<ref>PMID:35704353</ref>  | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>  | |
| - | [[Category:   | + | </div>  | 
| - | [[Category:   | + | <div class="pdbe-citations 7my7" style="background-color:#fffaf0;"></div>  | 
| - | [[Category: Newman  | + | == References ==  | 
| + | <references/>  | ||
| + | __TOC__  | ||
| + | </StructureSection>  | ||
| + | [[Category: Large Structures]]  | ||
| + | [[Category: Synechococcus elongatus PCC 7942 = FACHB-805]]  | ||
| + | [[Category: Newman J]]  | ||
| + | [[Category: Peat TS]]  | ||
Current revision
Se-CrtE N-term His-tag structure
  | |||||||||||
