7cfb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:07, 29 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Drosophila melanogaster Krimper eTud1 apo structure==
==Drosophila melanogaster Krimper eTud1 apo structure==
-
<StructureSection load='7cfb' size='340' side='right'caption='[[7cfb]]' scene=''>
+
<StructureSection load='7cfb' size='340' side='right'caption='[[7cfb]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CFB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7cfb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CFB FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cfb OCA], [https://pdbe.org/7cfb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cfb RCSB], [https://www.ebi.ac.uk/pdbsum/7cfb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cfb ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cfb OCA], [https://pdbe.org/7cfb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cfb RCSB], [https://www.ebi.ac.uk/pdbsum/7cfb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cfb ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A1ZAC4_DROME A1ZAC4_DROME]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
PIWI proteins use guide piRNAs to repress selfish genomic elements, protecting the genomic integrity of gametes and ensuring the fertility of animal species. Efficient transposon repression depends on amplification of piRNA guides in the ping-pong cycle, which in Drosophila entails tight cooperation between two PIWI proteins, Aub and Ago3. Here we show that post-translational modification, symmetric dimethylarginine (sDMA), of Aub is essential for piRNA biogenesis, transposon silencing and fertility. Methylation is triggered by loading of a piRNA guide into Aub, which exposes its unstructured N-terminal region to the PRMT5 methylosome complex. Thus, sDMA modification is a signal that Aub is loaded with piRNA guide. Amplification of piRNA in the ping-pong cycle requires assembly of a tertiary complex scaffolded by Krimper, which simultaneously binds the N-terminal regions of Aub and Ago3. To promote generation of new piRNA, Krimper uses its two Tudor domains to bind Aub and Ago3 in opposite modification and piRNA-loading states. Our results reveal that post-translational modifications in unstructured regions of PIWI proteins and their binding by Tudor domains that are capable of discriminating between modification states is essential for piRNA biogenesis and silencing.
 +
 +
Binding of guide piRNA triggers methylation of the unstructured N-terminal region of Aub leading to assembly of the piRNA amplification complex.,Huang X, Hu H, Webster A, Zou F, Du J, Patel DJ, Sachidanandam R, Toth KF, Aravin AA, Li S Nat Commun. 2021 Jul 1;12(1):4061. doi: 10.1038/s41467-021-24351-x. PMID:34210982<ref>PMID:34210982</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7cfb" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Drosophila melanogaster]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Hu H]]
[[Category: Hu H]]
[[Category: Li S]]
[[Category: Li S]]

Current revision

Drosophila melanogaster Krimper eTud1 apo structure

PDB ID 7cfb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools