This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4rfe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:49, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4rfe' size='340' side='right'caption='[[4rfe]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
<StructureSection load='4rfe' size='340' side='right'caption='[[4rfe]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rfe]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Macmu Macmu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RFE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rfe]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Macaca_mulatta Macaca mulatta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RFE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4h8w|4h8w]], [[4rfn|4rfn]], [[4jzw|4jzw]], [[4rfo|4rfo]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Fab heavy chain of ADCC-potent anti-HIV-1 antibody JR4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9544 MACMU]), Fab light chain of ADCC-potent anti-HIV-1 antibody JR4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9544 MACMU])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rfe OCA], [https://pdbe.org/4rfe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rfe RCSB], [https://www.ebi.ac.uk/pdbsum/4rfe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rfe ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rfe OCA], [https://pdbe.org/4rfe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rfe RCSB], [https://www.ebi.ac.uk/pdbsum/4rfe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rfe ProSAT]</span></td></tr>
</table>
</table>
Line 28: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Macmu]]
+
[[Category: Macaca mulatta]]
-
[[Category: Gohain, N]]
+
[[Category: Gohain N]]
-
[[Category: Pazgier, M]]
+
[[Category: Pazgier M]]
-
[[Category: Tolbert, W D]]
+
[[Category: Tolbert WD]]
-
[[Category: Wu, X]]
+
[[Category: Wu X]]
-
[[Category: Adcc]]
+
-
[[Category: Anti-hiv-1 env antibody jr4]]
+
-
[[Category: Cd4i antibody]]
+
-
[[Category: Hiv-1 env]]
+
-
[[Category: Hiv-1 gp120 specific antibody]]
+
-
[[Category: Immune system]]
+

Current revision

Crystal structure of ADCC-potent ANTI-HIV-1 Rhesus macaque antibody JR4 Fab

PDB ID 4rfe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools