1bea

From Proteopedia

(Difference between revisions)

Current revision

BIFUNCTIONAL HAGEMAN FACTOR/AMYLASE INHIBITOR FROM MAIZE

Structural highlights

1bea is a 1 chain structure with sequence from Zea mays. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 1.95Å
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ITRF_MAIZE Potent inhibitor of mammalian trypsin and a specific inhibitor of factor XIIa (activated hageman factor).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Corn Hageman factor inhibitor (CHFI) is a bifunctional 127 residue, 13.6 kDa protein isolated from corn seeds. It inhibits mammalian trypsin and Factor XIIa (Hageman Factor) of the contact pathway of coagulation as well as alpha-amylases from several insect species. Among the plasma proteinases, CHFI specifically inhibits Factor XIIa without affecting the activity of other coagulation proteinases. We have isolated CHFI from corn and determined the crystallographic structure at 1.95 A resolution. Additionally, we have solved the structure of the recombinant protein produced in Escherichia coli at 2.2 A resolution. The two proteins are essentially identical. The proteinase binding loop is in the canonical conformation for proteinase inhibitors. In an effort to understand alpha-amylase inhibition by members of the family of 25 cereal trypsin/alpha-amylase inhibitors, we have made three-dimensional models of several proteins in the family based on the CHFI coordinates and the coordinates determined for wheat alpha-amylase inhibitor 0.19 [Oda, Y., Matsunaga, T., Fukuyama, K., Miyazaki, T., and Morimoto, T. (1997) Biochemistry 36, 13503-13511]. From an analysis of the models and a structure-based sequence analysis, we propose a testable hypothesis for the regions of these proteins which bind alpha-amylase. In the course of the investigations, we have found that the cereal trypsin/alpha-amylase inhibitor family is evolutionarily related to the family of nonspecific lipid-transfer proteins of plants. This is a new addition to the group which now consists of the trypsin/alpha-amylase inhibitors, 2S seed storage albumins, and the lipid-transfer family. Apparently, the four-helix conformation has been a successful vehicle in plant evolution for providing protection from predators, food for the embryo, and lipid transfer.

Structural determinants of the bifunctional corn Hageman factor inhibitor: x-ray crystal structure at 1.95 A resolution.,Behnke CA, Yee VC, Trong IL, Pedersen LC, Stenkamp RE, Kim SS, Reeck GR, Teller DC Biochemistry. 1998 Nov 3;37(44):15277-88. PMID:9799488^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Behnke CA, Yee VC, Trong IL, Pedersen LC, Stenkamp RE, Kim SS, Reeck GR, Teller DC. Structural determinants of the bifunctional corn Hageman factor inhibitor: x-ray crystal structure at 1.95 A resolution. Biochemistry. 1998 Nov 3;37(44):15277-88. PMID:9799488 doi:10.1021/bi9812266

1 Structural highlights
2 Function
3 Evolutionary Conservation
4 Publication Abstract from PubMed
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1bea"

@@ Line 4: / Line 4: @@
 == Structural highlights ==
 <table><tr><td colspan='2'>[[1bea]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BEA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BEA FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bea FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bea OCA], [https://pdbe.org/1bea PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bea RCSB], [https://www.ebi.ac.uk/pdbsum/1bea PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bea ProSAT]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bea FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bea OCA], [https://pdbe.org/1bea PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bea RCSB], [https://www.ebi.ac.uk/pdbsum/1bea PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bea ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[https://www.uniprot.org/uniprot/ITRF_MAIZE ITRF_MAIZE]] Potent inhibitor of mammalian trypsin and a specific inhibitor of factor XIIa (activated hageman factor).
+[https://www.uniprot.org/uniprot/ITRF_MAIZE ITRF_MAIZE] Potent inhibitor of mammalian trypsin and a specific inhibitor of factor XIIa (activated hageman factor).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 13: / Line 14: @@
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/1bea_consurf.spt"</scriptWhenChecked>
-    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
@@ Line 33: / Line 34: @@
 [[Category: Large Structures]]
 [[Category: Zea mays]]
-[[Category: Behnke, C A]]
+[[Category: Behnke CA]]
-[[Category: Kim, S S]]
+[[Category: Kim SS]]
-[[Category: Pedersen, L C]]
+[[Category: Le Trong I]]
-[[Category: Reeck, G R]]
+[[Category: Pedersen LC]]
-[[Category: Stenkamp, R E]]
+[[Category: Reeck GR]]
-[[Category: Teller, D C]]
+[[Category: Stenkamp RE]]
-[[Category: Trong, I Le]]
+[[Category: Teller DC]]
-[[Category: Yee, V C]]
+[[Category: Yee VC]]
-[[Category: Amylase/protease bifunctional inhibitor]]
-[[Category: Serine protease inhibitor]]

1bea

From Proteopedia

Current revision

BIFUNCTIONAL HAGEMAN FACTOR/AMYLASE INHIBITOR FROM MAIZE

Structural highlights

Function

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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