This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2mit

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 8 March 2023) (edit) (undo)
 
Line 1: Line 1:
==Solution structure of oxidized dimeric form of human defensin 5==
==Solution structure of oxidized dimeric form of human defensin 5==
-
<StructureSection load='2mit' size='340' side='right'caption='[[2mit]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2mit' size='340' side='right'caption='[[2mit]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2mit]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MIT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MIT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2mit]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MIT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MIT FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2lxz|2lxz]], [[1zmp|1zmp]]</div></td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mit FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mit OCA], [https://pdbe.org/2mit PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mit RCSB], [https://www.ebi.ac.uk/pdbsum/2mit PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mit ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DEF5, DEFA5 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mit FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mit OCA], [https://pdbe.org/2mit PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mit RCSB], [https://www.ebi.ac.uk/pdbsum/2mit PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mit ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/DEF5_HUMAN DEF5_HUMAN]] Has antimicrobial activity against Gram-negative and Gram-positive bacteria. Defensins are thought to kill microbes by permeabilizing their plasma membrane. All DEFA5 peptides exert antimicrobial activities, but their potency is affected by peptide processing.<ref>PMID:12021776</ref> <ref>PMID:15616305</ref> <ref>PMID:17088326</ref>
+
[https://www.uniprot.org/uniprot/DEF5_HUMAN DEF5_HUMAN] Has antimicrobial activity against Gram-negative and Gram-positive bacteria. Defensins are thought to kill microbes by permeabilizing their plasma membrane. All DEFA5 peptides exert antimicrobial activities, but their potency is affected by peptide processing.<ref>PMID:12021776</ref> <ref>PMID:15616305</ref> <ref>PMID:17088326</ref>
==See Also==
==See Also==
Line 17: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Nolan, E M]]
+
[[Category: Nolan EM]]
-
[[Category: Wagner, G]]
+
[[Category: Wagner G]]
-
[[Category: Wommack, A J]]
+
[[Category: Wommack AJ]]
-
[[Category: Ziarek, J J]]
+
[[Category: Ziarek JJ]]
-
[[Category: Antimicrobial peptide]]
+
-
[[Category: Antimicrobial protein]]
+
-
[[Category: Cysteine knot]]
+

Current revision

Solution structure of oxidized dimeric form of human defensin 5

PDB ID 2mit

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools