This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Chaperonin 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:03, 21 November 2022) (edit) (undo)
 
Line 6: Line 6:
*'''Group I'''
*'''Group I'''
-
*''Large subunit''
+
*''Large subunit'' or Hsp60 [[Heat shock protein]]
-
**[[7azp]] – hCpn60 – human – Cryo EM<br />
 
**[[3m6c]] – MtGroEL1 apical domain – ''Mycobacterium tuberculosis''<BR />
**[[3m6c]] – MtGroEL1 apical domain – ''Mycobacterium tuberculosis''<BR />
**[[1sjp]], [[3rtk]] – MtGroEL2 residues 42-539<BR />
**[[1sjp]], [[3rtk]] – MtGroEL2 residues 42-539<BR />
-
**[[2eu1]], [[4v43]], [[1oel]], [[1grl]], [[2yey]], [[4wsc]], [[4wgl]], [[5opw]] – EcGroEL (mutant) - ''Escherichia coli''<BR />
+
**[[4v43]], [[2yey]], [[4wsc]], [[4wgl]], [[5opw]] – EcGroEL (mutant) - ''Escherichia coli''<BR />
-
**[[3e76]], [[2nwc]], [[1xck]], [[1ss8]], [[4hel]] – EcGroEL<BR />
+
**[[1xck]], [[1ss8]], [[4hel]] – EcGroEL<BR />
**[[3c9v]], [[3cau]], [[2ynj]], [[5w0s]] – EcGroEL – Cryo EM<BR />
**[[3c9v]], [[3cau]], [[2ynj]], [[5w0s]] – EcGroEL – Cryo EM<BR />
-
**[[2c7e]], [[1gr5]], [[4aaq]] - EcGroEL (mutant) – Cryo EM<BR />
+
**[[2c7e]], [[4aaq]] - EcGroEL (mutant) – Cryo EM<BR />
-
**[[1dk7]], [[1la1]] - EcGroEL apical domain<br />
+
**[[1fy9]], [[1fya]], [[3vz6]], [[3vz7]], [[3vz8]] – EcGroEL apical domain (mutant) <BR />
-
**[[1fy9]], [[1fya]], [[1kid]], [[1jon]], [[3vz6]], [[3vz7]], [[3vz8]] – EcGroEL apical domain (mutant) <BR />
+
-
**[[1srv]] – TtCpn60 apical domain - ''Thermus thermophilus''<BR />
+
**[[3osx]] - Cpn60 apical domain – ''Xenorhabdus nematophila''<br />
**[[3osx]] - Cpn60 apical domain – ''Xenorhabdus nematophila''<br />
**[[1iok]] – Cpn60 – ''Paracoccus denitrificans''<br />
**[[1iok]] – Cpn60 – ''Paracoccus denitrificans''<br />
Line 26: Line 23:
*''Large subunit binary complex''
*''Large subunit binary complex''
-
**[[4pj1]] - hGroEL + ADP <br />
 
**[[1kp8]] - EcGroEL (mutant) + ATP<BR />
**[[1kp8]] - EcGroEL (mutant) + ATP<BR />
**[[4aar]], [[4aas]], [[4aau]], [[4ab2]], [[4ab3]] - EcGroEL (mutant) + ATP – Cryo EM<br />
**[[4aar]], [[4aas]], [[4aau]], [[4ab2]], [[4ab3]] - EcGroEL (mutant) + ATP – Cryo EM<br />
Line 33: Line 29:
**[[4ki8]] - EcGroEL (mutant) + ADP<br />
**[[4ki8]] - EcGroEL (mutant) + ADP<br />
**[[1mnf]] – EcGroEL + polypeptide<BR />
**[[1mnf]] – EcGroEL + polypeptide<BR />
-
**[[2cgt]] – EcGroEL + capsid assbly protein GP31 – Cryo EM<BR />
 
-
**[[1dkd]] - EcGroEL apical domain + polypeptide<br />
 
**[[7k3z]] – Cpn60 (mutant) + ATP – ''Plasmodium falciparum''<br />
**[[7k3z]] – Cpn60 (mutant) + ATP – ''Plasmodium falciparum''<br />
Line 47: Line 41:
*''Large + small subunit''
*''Large + small subunit''
-
**[[6ht7]] - hCpn60 + Cpn10 + ADP <br />
 
-
**[[6mrc]], [[6mrd]] - hCpn60 + Cpn10 + ADP – Cryo EM<br />
 
**[[1svt]], [[1pcq]] - EcGroEL + GroES<BR />
**[[1svt]], [[1pcq]] - EcGroEL + GroES<BR />
**[[1pf9]], [[1aon]], [[4pko]], [[5opx]] - EcGroEL + GroES + ADP<BR />
**[[1pf9]], [[1aon]], [[4pko]], [[5opx]] - EcGroEL + GroES + ADP<BR />
**[[3wvl]] - EcGroEL (mutant) + GroES + ATP<br />
**[[3wvl]] - EcGroEL (mutant) + GroES + ATP<br />
-
**[[2c7c]], [[2c7d]] - EcGroEL + GroES – Cryo EM<BR />
+
**[[3zpz]], [[3zq0]], [[3zq1]], [[7pbj]], [[7pbx]] - EcGroEL + GroES + ADP – Cryo EM<br />
-
**[[1gru]] - EcGroEL + GroES + ATP + ADP – Cryo EM<BR />
+
**[[7vwx]] - EcGroEL + GroES + RuBisCO – Cryo EM<br />
-
**[[3zpz]], [[3zq0]], [[3zq1]] - EcGroEL + GroES + ADP – Cryo EM<br />
+
**[[4pkn]] - TtCpn60 + Cpn10 + ADP
-
**[[4v4o]], [[4pkn]] - TtCpn60 + Cpn10 + ADP
+
*'''Group II'''
*'''Group II'''
-
**[[3izh]], [[3izi]], [[3izj]], [[3izk]], [[3izl]], [[3izm]], [[3izn]], [[3los]], [[3iyf]], [[3j3x]] – MmCpn – ''Methanococcus maripaludis'' – EM<BR />
+
**[[3izh]], [[3izi]], [[3izj]], [[3izk]], [[3izl]], [[3izm]], [[3izn]], [[3los]], [[3iyf]], [[3j3x]], [[7r9e]], [[7r9h]], [[7r9i]], [[7r9j]], [[7r9k]], [[7r9m]], [[7r9o]], [[7r9u]] – MmCpn – ''Methanococcus maripaludis'' – Cryo EM<BR />
**[[3kfb]], [[3kfe]], [[3kfk]] – MmCpn<BR />
**[[3kfb]], [[3kfe]], [[3kfk]] – MmCpn<BR />
**[[5w79]] - MmCpn (mutant)<br />
**[[5w79]] - MmCpn (mutant)<br />
Line 65: Line 56:
**[[3ruq]] - MmCpn + ADP<br />
**[[3ruq]] - MmCpn + ADP<br />
**[[3rus]], [[5w74]] - MmCpn (mutant) + ADP<br />
**[[3rus]], [[5w74]] - MmCpn (mutant) + ADP<br />
 +
**[[7rak]] – MmCpn + ATP – Cryo EM<br />
**[[3ruw]] - MmCpn (mutant) + ADP-AlF3<br />
**[[3ruw]] - MmCpn (mutant) + ADP-AlF3<br />
**[[3ruv]] - MmCpn (mutant) + ATP analog<br />
**[[3ruv]] - MmCpn (mutant) + ATP analog<br />
Line 70: Line 62:
*'''CCT''' or '''TRiC'''
*'''CCT''' or '''TRiC'''
-
**[[6krd]], [[6kre]], [[6ks6]], [[6ks8]], [[6qb8]] - hCpn CCT + ADP – Cryo EM<br />
+
**[[6krd]], [[6kre]], [[6ks6]], [[6ks8]], [[6qb8]] - hCpn CCT + ADP – human - Cryo EM<br />
**[[7lum]] - hCpn CCT + ATP – Cryo EM<br />
**[[7lum]] - hCpn CCT + ATP – Cryo EM<br />
**[[6nr8]], [[6nr9]], [[6nrb]], [[6nrc]], [[6nrd]] - hCpn CCT + HPFD – Cryo EM<br />
**[[6nr8]], [[6nr9]], [[6nrb]], [[6nrc]], [[6nrd]] - hCpn CCT + HPFD – Cryo EM<br />
Line 84: Line 76:
*'''Hsp33''' see [[Heat Shock Proteins]]
*'''Hsp33''' see [[Heat Shock Proteins]]
 +
 +
*'''chaperonin11 or Hsp10'''
 +
 +
**[[7ekq]] – Chap11 in ClpP complex – ''Chlamydomonas smithii'' – Cryo EM<br />
*'''Thermosome'''
*'''Thermosome'''

Current revision

3D Structures of Chaperonin

Updated on 21-November-2022

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

Retrieved from "http://52.214.119.220/wiki/index.php/Chaperonin_3D_structures"
Personal tools