This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2odx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:17, 28 December 2023) (edit) (undo)
 
Line 1: Line 1:
==Solution structure of Zn(II)Cox4==
==Solution structure of Zn(II)Cox4==
-
<StructureSection load='2odx' size='340' side='right'caption='[[2odx]], [[NMR_Ensembles_of_Models | 21 NMR models]]' scene=''>
+
<StructureSection load='2odx' size='340' side='right'caption='[[2odx]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2odx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ODX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ODX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2odx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ODX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ODX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">COX4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cytochrome-c_oxidase Cytochrome-c oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.9.3.1 1.9.3.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2odx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2odx OCA], [https://pdbe.org/2odx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2odx RCSB], [https://www.ebi.ac.uk/pdbsum/2odx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2odx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2odx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2odx OCA], [https://pdbe.org/2odx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2odx RCSB], [https://www.ebi.ac.uk/pdbsum/2odx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2odx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/COX4_YEAST COX4_YEAST]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
 
-
[[Category: Cytochrome-c oxidase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Ciofi-Baffoni, S]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: III, J H.Coyne]]
+
[[Category: Ciofi-Baffoni S]]
-
[[Category: All beta-protein]]
+
[[Category: Coyne III JH]]
-
[[Category: Metallo-protein]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Solution structure of Zn(II)Cox4

PDB ID 2odx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools