2oez

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:23, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2oez' size='340' side='right'caption='[[2oez]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
<StructureSection load='2oez' size='340' side='right'caption='[[2oez]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2oez]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OEZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2oez]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OEZ FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP2528 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oez OCA], [https://pdbe.org/2oez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oez RCSB], [https://www.ebi.ac.uk/pdbsum/2oez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oez ProSAT], [https://www.topsan.org/Proteins/MCSG/2oez TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oez OCA], [https://pdbe.org/2oez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oez RCSB], [https://www.ebi.ac.uk/pdbsum/2oez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oez ProSAT], [https://www.topsan.org/Proteins/MCSG/2oez TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ZAPD_VIBPA ZAPD_VIBPA]] Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.[HAMAP-Rule:MF_01092]
+
[https://www.uniprot.org/uniprot/ZAPD_VIBPA ZAPD_VIBPA] Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.[HAMAP-Rule:MF_01092]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oe/2oez_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oe/2oez_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 23: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Vibpa]]
+
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
-
[[Category: Abdullah, J]]
+
[[Category: Abdullah J]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Kim, Y]]
+
[[Category: Kim Y]]
-
[[Category: Structural genomic]]
+
[[Category: Volkart L]]
-
[[Category: Volkart, L]]
+
-
[[Category: Alpha-structure]]
+
-
[[Category: Immunoglobulin fold]]
+
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Unknown function]]
+

Current revision

Protein of Unknown Function (DUF1342) from Vibrio parahaemolyticus

PDB ID 2oez

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools