7n5c

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(New page: '''Unreleased structure''' The entry 7n5c is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures)
Current revision (11:36, 30 October 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7n5c is ON HOLD until Paper Publication
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==6218 TCR in complex with H2Db PA with an engineered TCR-pMHC disulfide bond==
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<StructureSection load='7n5c' size='340' side='right'caption='[[7n5c]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7n5c]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7N5C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7N5C FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.87&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7n5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7n5c OCA], [https://pdbe.org/7n5c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7n5c RCSB], [https://www.ebi.ac.uk/pdbsum/7n5c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7n5c ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PA_I97A1 PA_I97A1] Plays an essential role in viral RNA transcription and replication by forming the heterotrimeric polymerase complex together with PB1 and PB2 subunits. The complex transcribes viral mRNAs by using a unique mechanism called cap-snatching. It consists in the hijacking and cleavage of host capped pre-mRNAs. These short capped RNAs are then used as primers for viral mRNAs. The PB2 subunit is responsible for the binding of the 5' cap of cellular pre-mRNAs which are subsequently cleaved after 10-13 nucleotides by the PA subunit that carries the endonuclease activity.[HAMAP-Rule:MF_04063]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Interactions between a T cell receptor (TCR) and a peptide-major histocompatibility complex (pMHC) ligand are typically mediated by noncovalent bonds. By studying T cells expressing natural or engineered TCRs, here we describe covalent TCR-pMHC interactions that involve a cysteine-cysteine disulfide bond between the TCR and the peptide. By introducing cysteines into a known TCR-pMHC combination, we demonstrate that disulfide bond formation does not require structural rearrangement of the TCR or the peptide. We further show these disulfide bonds still form even when the initial affinity of the TCR-pMHC interaction is low. Accordingly, TCR-peptide disulfide bonds facilitate T cell activation by pMHC ligands with a wide spectrum of affinities for the TCR. Physiologically, this mechanism induces strong Zap70-dependent TCR signaling, which triggers T cell deletion or agonist selection in the thymus cortex. Covalent TCR-pMHC interactions may thus underlie a physiological T cell activation mechanism that has applications in basic immunology and potentially in immunotherapy.
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Authors:
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Covalent TCR-peptide-MHC interactions induce T cell activation and redirect T cell fate in the thymus.,Szeto C, Zareie P, Wirasinha RC, Zhang JB, Nguyen AT, Riboldi-Tunnicliffe A, La Gruta NL, Gras S, Daley SR Nat Commun. 2022 Aug 23;13(1):4951. doi: 10.1038/s41467-022-32692-4. PMID:35999236<ref>PMID:35999236</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 7n5c" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Beta-2 microglobulin 3D structures|Beta-2 microglobulin 3D structures]]
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*[[T-cell receptor 3D structures|T-cell receptor 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Influenza A virus]]
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: Gras S]]
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[[Category: Szeto C]]

Current revision

6218 TCR in complex with H2Db PA with an engineered TCR-pMHC disulfide bond

PDB ID 7n5c

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