2p9m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:27, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2p9m' size='340' side='right'caption='[[2p9m]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
<StructureSection load='2p9m' size='340' side='right'caption='[[2p9m]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2p9m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Metja Metja]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9M FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2p9m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9M FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MJ0922 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243232 METJA])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9m OCA], [https://pdbe.org/2p9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9m RCSB], [https://www.ebi.ac.uk/pdbsum/2p9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9m ProSAT], [https://www.topsan.org/Proteins/RSGI/2p9m TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9m OCA], [https://pdbe.org/2p9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9m RCSB], [https://www.ebi.ac.uk/pdbsum/2p9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9m ProSAT], [https://www.topsan.org/Proteins/RSGI/2p9m TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Y922_METJA Y922_METJA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9m_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9m_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 21: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Metja]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: Charz, J]]
+
[[Category: Charz J]]
-
[[Category: Chen, L]]
+
[[Category: Chen L]]
-
[[Category: Ebihara, A]]
+
[[Category: Ebihara A]]
-
[[Category: Fu, Z Q]]
+
[[Category: Fu Z-Q]]
-
[[Category: II, J T.Swindell]]
+
[[Category: Kuramitsu S]]
-
[[Category: Kuramitsu, S]]
+
[[Category: Rose JP]]
-
[[Category: Structural genomic]]
+
[[Category: Shinkai A]]
-
[[Category: Rose, J P]]
+
[[Category: Swindell II JT]]
-
[[Category: Shinkai, A]]
+
[[Category: Wang B-C]]
-
[[Category: Wang, B C]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S]]
+
[[Category: Zhao M]]
-
[[Category: Zhao, M]]
+
[[Category: Zhu J]]
-
[[Category: Zhu, J]]
+
-
[[Category: Methanocaldococcus jannaschii]]
+
-
[[Category: Mj0922]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Secsg]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661

PDB ID 2p9m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools