This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2pu7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:09, 30 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2pu7' size='340' side='right'caption='[[2pu7]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
<StructureSection load='2pu7' size='340' side='right'caption='[[2pu7]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2pu7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Burxl Burxl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PU7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2pu7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paraburkholderia_xenovorans_LB400 Paraburkholderia xenovorans LB400]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PU7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2og1|2og1]], [[1j1i|1j1i]], [[2d0d|2d0d]], [[1c4x|1c4x]], [[1u2e|1u2e]], [[2pu5|2pu5]], [[2pu6|2pu6]], [[2puh|2puh]], [[2puj|2puj]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bphD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266265 BURXL])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pu7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pu7 OCA], [https://pdbe.org/2pu7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pu7 RCSB], [https://www.ebi.ac.uk/pdbsum/2pu7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pu7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pu7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pu7 OCA], [https://pdbe.org/2pu7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pu7 RCSB], [https://www.ebi.ac.uk/pdbsum/2pu7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pu7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/BPHD_BURXL BPHD_BURXL]] Catalyzes an unusual C-C bond hydrolysis of 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid (HOPDA) to produce benzoic acid and 2-hydroxy-2,4-pentadienoic acid (HPD).<ref>PMID:16964968</ref>
+
[https://www.uniprot.org/uniprot/BPHD_PARXL BPHD_PARXL] Catalyzes an unusual C-C bond hydrolysis of 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid (HOPDA) to produce benzoic acid and 2-hydroxy-2,4-pentadienoic acid (HPD).<ref>PMID:16964968</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 34: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Burxl]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bhowmik, S]]
+
[[Category: Paraburkholderia xenovorans LB400]]
-
[[Category: Bolin, J T]]
+
[[Category: Bhowmik S]]
-
[[Category: C-c bond hydrolase]]
+
[[Category: Bolin JT]]
-
[[Category: Hydrolase]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal Structure of S112A/H265A double mutant of a C-C hydrolase, BphD, from Burkholderia xenovorans LB400

PDB ID 2pu7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools