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Cytochrome C 3D structures

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Current revision (21:21, 22 February 2023) (edit) (undo)
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Line 24: Line 24:
**[[2orl]] - yCyt (mutant) – NMR<BR />
**[[2orl]] - yCyt (mutant) – NMR<BR />
**[[1rap]], [[1raq]], [[1ycc]], [[6rsk]], [[6rsl]] - yCyt iso-1<BR />
**[[1rap]], [[1raq]], [[1ycc]], [[6rsk]], [[6rsl]] - yCyt iso-1<BR />
-
**[[1irv]], [[1irw]], [[1lms]], [[4mu8]], [[4n0k]], [[6gda]], [[6gd9]], [[6gd8]], [[6gd7]], [[6gd6]], [[5t7h]], [[5kke]], [[4qao]], [[4q5p]] – yCyt iso-1 (mutant) <BR />
+
**[[1irv]], [[1irw]], [[1lms]], [[4mu8]], [[4n0k]], [[6gda]], [[6gd9]], [[6gd8]], [[6gd7]], [[6gd6]], [[5t7h]], [[5kke]], [[4qao]], [[4q5p]], [[7mri]] – yCyt iso-1 (mutant) <BR />
**[[1yic]] – yCyt iso-1 – NMR<BR />
**[[1yic]] – yCyt iso-1 – NMR<BR />
**[[2hv4]], [[2lir]], [[2lit]], [[2mhm]] - yCyt iso-1 (mutant) - NMR<br />
**[[2hv4]], [[2lir]], [[2lit]], [[2mhm]] - yCyt iso-1 (mutant) - NMR<br />
Line 48: Line 48:
**[[6c4w]] – Cyt – ''Pichia membranifaciens'' <br />
**[[6c4w]] – Cyt – ''Pichia membranifaciens'' <br />
**[[5lo9]] – Cyt – ''Marichromatium purpuratum'' <br />
**[[5lo9]] – Cyt – ''Marichromatium purpuratum'' <br />
-
**[[6tk0]] – TpCyt – ''Thioalkalivibrio paradoxus'' <br />
+
**[[7o9u]] – TpCyt – ''Thioalkalivibrio paradoxus'' <br />
 +
**[[7lq5]], [[7tfs]], [[8d9m]] - GsCyt residues 25-282 – ''Geobacter sulfurreducens'' – Cryo EM<br />
 +
**[[7tlx]] – Cyt - ''Pseudomonas putida''<br />
*Cytochrome C complex
*Cytochrome C complex
Line 59: Line 61:
**[[5juy]] - bCyt + APAF-1 + caspase-9 – Cryo EM <br />
**[[5juy]] - bCyt + APAF-1 + caspase-9 – Cryo EM <br />
**[[3j2t]] – bCyt + apoptotic protease-activating factor 1 – Cryo EM<br />
**[[3j2t]] – bCyt + apoptotic protease-activating factor 1 – Cryo EM<br />
 +
**[[7o3c]], [[7o3h]] - mCyt in complex III – Cryo EM <br />
**[[2jti]], [[3tyi]] – yCyt (mutant) + Cyt peroxidase – yeast<BR />
**[[2jti]], [[3tyi]] – yCyt (mutant) + Cyt peroxidase – yeast<BR />
**[[2pcb]] - yCyt + Cyt peroxidase<BR />
**[[2pcb]] - yCyt + Cyt peroxidase<BR />
Line 66: Line 69:
**[[1nmi]] – yCyt iso-1 + imidazole<BR />
**[[1nmi]] – yCyt iso-1 + imidazole<BR />
**[[2b0z]], [[2b10]], [[2b11]], [[2b12]], [[1u74]], [[1s6v]], [[2bcn]] – yCyt iso-1 (mutant) + Cyt peroxidase<BR />
**[[2b0z]], [[2b10]], [[2b11]], [[2b12]], [[1u74]], [[1s6v]], [[2bcn]] – yCyt iso-1 (mutant) + Cyt peroxidase<BR />
-
**[[5lft]], [[5kpf]], [[6suy]] – yCyt iso-1 + pegylated calix arene derivative<br />
+
**[[5lft]], [[5kpf]], [[6suy]], [[7pr2]], [[7pr3]], [[7pr4]] – yCyt iso-1 + pegylated calix arene derivative<br />
 +
**[[7bbt]] – yCyt iso-1 + drug<br />
**[[6egz]], [[6egy]], [[5ncv]], [[5lyc]], [[4ye1]], [[6y0j]] – yCyt iso-1 (mutant) + pegylated calix arene derivative<br />
**[[6egz]], [[6egy]], [[5ncv]], [[5lyc]], [[4ye1]], [[6y0j]] – yCyt iso-1 (mutant) + pegylated calix arene derivative<br />
**[[5klu]] – yCyt iso-1 (mutant) + maltopyranoside<br />
**[[5klu]] – yCyt iso-1 (mutant) + maltopyranoside<br />
Line 76: Line 80:
**[[1fs7]], [[1fs8]], [[1fs9]] – WsCyt + small molecule – ''Wolinella succinogenes''<BR />
**[[1fs7]], [[1fs8]], [[1fs9]] – WsCyt + small molecule – ''Wolinella succinogenes''<BR />
**[[5n1t]] – TpCyt + sulfide dehydrogenase + Copc <br />
**[[5n1t]] – TpCyt + sulfide dehydrogenase + Copc <br />
 +
**[[7uea]] - CtCyt in photosystem P480 – Cryo EM <br />
*Cytochrome C’
*Cytochrome C’
Line 118: Line 123:
**[[3h1h]], [[1bcc]] - cCyt in Bc1 complex – chicken<br />
**[[3h1h]], [[1bcc]] - cCyt in Bc1 complex – chicken<br />
**[[3h1i]], [[2bcc]], [[3bcc]] - cCyt in Bc1 complex + inhibitor<br />
**[[3h1i]], [[2bcc]], [[3bcc]] - cCyt in Bc1 complex + inhibitor<br />
-
**[[7jrp]] - Cyt in Bc1 complex – mung bean - Cryo EM<br />
+
**[[7jrg]], [[7jrp]] - Cyt in Bc1 complex – mung bean - Cryo EM<br />
**[[1kyo]], 3cx5, 3cxh – yCyt in Bc1 complex <br />
**[[1kyo]], 3cx5, 3cxh – yCyt in Bc1 complex <br />
**[[2ibz]] - yCyt in Bc1 complex + inhibitor<br />
**[[2ibz]] - yCyt in Bc1 complex + inhibitor<br />
Line 171: Line 176:
**[[1a2i]] - DvCyt<br />
**[[1a2i]] - DvCyt<br />
**[[2ldo]] – GsCyt residues 21-91 – ''Geobacter sulfurreducens'' - NMR<br />
**[[2ldo]] – GsCyt residues 21-91 – ''Geobacter sulfurreducens'' - NMR<br />
 +
**[[6ef8]] - GsCyt residues 21-91 (mutant) <br />
**[[2izz]] - GsCyt residues 21-91 (mutant) – NMR<br />
**[[2izz]] - GsCyt residues 21-91 (mutant) – NMR<br />
**[[3ov0]] – GsCyt residues 26-343 dodedcaheme<br />
**[[3ov0]] – GsCyt residues 26-343 dodedcaheme<br />
Line 187: Line 193:
**[[1cc5]] – Cyt – ''Azotobacter vinelandii''
**[[1cc5]] – Cyt – ''Azotobacter vinelandii''
-
*Cytochrome C6
+
*Cytochrome C6 see [[Cytochrome f]]
-
 
+
-
**[[1ccr]] – Cyt - rice<br />
+
-
**[[2v07]], [[2dge]] – AtCyt residues 71-175 – ''Arabidopsis thaliana''<BR />
+
-
**[[2ce0]], [[2ce1]] - AtCyt residues 71-175 (mutant) <BR />
+
-
**[[3ph2]] – PlCyt (mutant) – ''Phormidium laminosum''<BR />
+
-
**[[3dr0]], [[4eic]], [[4eie]] – SyCyt – ''Synechococcus''<BR />
+
-
**[[4eid]], [[4eif]] – SyCyt (mutant)<br />
+
-
**[[3dmi]] – Cyt – ''Phaeodactylum tricornutum''<BR />
+
-
**[[2zbo]] – Cyt – ''Hizikia fusiformis''<BR />
+
-
**[[2v08]] – PlCyt <BR />
+
-
**[[1ls9]] – Cyt – ''Cladophora glomerata''<BR />
+
-
**[[1kib]], [[1f1f ]] – AmCyt – ''Arthrospira maxima''<BR />
+
-
**[[1gdv]] – Cyt – ''Porphyra yezoensis''<BR />
+
-
**[[1a2s]], [[1ced]] – MbCyt – ''Monoraphidium braunii'' – NMR<BR />
+
-
**[[1ctj]] - MbCyt<BR />
+
-
**[[1c6s]] – Cyt – ''Cyanobacterium synechococcus'' - NMR<BR />
+
-
**[[1c6o]], [[1c6r]] – Cyt – ''Scenedesmus obliquus''<br />
+
-
**[[4gyd]] – noCyt – nostoc<br />
+
-
**[[4h0j]], [[4h0k]] – noCyt (mutant) <br />
+
-
**[[6tr1]], [[6tsy]] – TeCyt - ''Thermosynechococcus elongatus''<br />
+
*Cytochrome C7
*Cytochrome C7
Line 214: Line 200:
**[[1lm2]], [[1l3o]], [[1kwj]], [[1f22]], [[1ehj]] – DaCyt – ''Deulfurmonas acetoxidans'' – NMR<BR />
**[[1lm2]], [[1l3o]], [[1kwj]], [[1f22]], [[1ehj]] – DaCyt – ''Deulfurmonas acetoxidans'' – NMR<BR />
**[[1hh5]] - DaCyt<br />
**[[1hh5]] - DaCyt<br />
-
**[[3sel]], [[3sj0]], [[3sj1]], [[3sj4]] – Cyt (mutant) – ''Geobascter desulfurreducens''<br />
+
**[[3sel]], [[3sj0]], [[3sj1]], [[3sj4]] – GsCyt (mutant) <br />
*Cytochrome C549
*Cytochrome C549
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**[[3wu2]], [[4v82]], [[3kzi]], [[3a0b]], [[3a0h]], [[4v62]], [[1izl]], [[5ws6]], [[5ws5]], [[5v2c]], [[5gti]], [[5gth]], [[5b66]], [[5b5e]], [[4ub8]], [[4ub6]], [[4il6]] – Cyt in photosystem II – ''Thermosynechococcus vulcanus''<BR />
**[[3wu2]], [[4v82]], [[3kzi]], [[3a0b]], [[3a0h]], [[4v62]], [[1izl]], [[5ws6]], [[5ws5]], [[5v2c]], [[5gti]], [[5gth]], [[5b66]], [[5b5e]], [[4ub8]], [[4ub6]], [[4il6]] – Cyt in photosystem II – ''Thermosynechococcus vulcanus''<BR />
-
**[[7d1t]], [[7d1u]] – TvCyt in photosystem II – Cyo EM<br />
+
**[[7d1t]], [[7d1u]], [[7eda]] – TvCyt in photosystem II – Cyo EM<br />
 +
**[[7rf1]], [[7rf2]] – Cyt in photosystem II – ''Thermosynechococcus vestitus''-Cryo EM<br />
**[[2axt]], [[1w5c]], [[1s5l]], [[5h2f]], [[5tis]], [[5mx2]], [[5kai]], [[5kaf]], [[5e7c]], [[5e79]], [[4tnk]], [[4tnj]], [[4tni]], [[4tnh]], [[4rvy]], [[4pj0]], [[4pbu]], [[4ixr]], [[4ixq]], [[4fby]] - TeCyt in photosystem II – ''Thermosynechococcus elongatus''<BR />
**[[2axt]], [[1w5c]], [[1s5l]], [[5h2f]], [[5tis]], [[5mx2]], [[5kai]], [[5kaf]], [[5e7c]], [[5e79]], [[4tnk]], [[4tnj]], [[4tni]], [[4tnh]], [[4rvy]], [[4pj0]], [[4pbu]], [[4ixr]], [[4ixq]], [[4fby]] - TeCyt in photosystem II – ''Thermosynechococcus elongatus''<BR />
**[[2bgv]] – PvCyt – ''Paracoccus versutus''<BR />
**[[2bgv]] – PvCyt – ''Paracoccus versutus''<BR />
Line 285: Line 272:
*Cytochrome C562
*Cytochrome C562
 +
**[[7rwv]], [[8drj]] – EcCyt <br />
 +
**[[7lrr]], [[7su2]] – EcCyt + Co <br />
 +
**[[7mk4]], [[7n4g]] – EcCyt (mutant) + Co<br />
 +
**[[7lr5]], [[7lra]], [[7lrb]], [[7lrv]] – EcCyt + Ni<br />
 +
**[[7lsn]], [[7n4f]], [[7rwu]] – EcCyt (mutant) + Ni<br />
 +
**[[7lsj]], [[7lsl]] – EcCyt + Cu <br />
 +
**[[7lv1]], [[7lv4]], [[7tep]] – EcCyt (mutant) + Cu<br />
 +
**[[8drf]], [[8drl]], [[8drm]] – EcCyt + Zn<br />
 +
**[[7dcl]], [[7rwx]], [[7rww]] – EcCyt (mutant) + Zn<br />
 +
**[[7rwy]] – EcCyt (mutant) + Fe<br />
 +
**[[6wz1]] – EcCyt + Mn<br />
 +
**[[6wz7]] – EcCyt (mutant) + Mn<br />
**[[3qvz]] – EcCyt + Cu + Zn
**[[3qvz]] – EcCyt + Cu + Zn
Line 297: Line 296:
**[[2c8s]] – MeCyt – ''Methylobacterium extorquens''<br />
**[[2c8s]] – MeCyt – ''Methylobacterium extorquens''<br />
**[[1mg2]], [[1mg3]] – PdCyt + methylamine hydrogenase + amicyanin<br />
**[[1mg2]], [[1mg3]] – PdCyt + methylamine hydrogenase + amicyanin<br />
 +
**[[7c90]] – Cyt - ''Methylophaga aminisulfidivorans'' <br />
*Cytochrome CC3
*Cytochrome CC3
Line 316: Line 316:
**[[6onq]] – MeCyt<br />
**[[6onq]] – MeCyt<br />
- 
-
*Cytochrome C omcs
 
- 
-
**[[6ef8]] – Cyt – ''Geobascter sulfurreducens''<br />
 
*Cytochrome CB562
*Cytochrome CB562

Current revision

3D structures of cytochrome C

Updated on 22-February-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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