7f3n
From Proteopedia
(Difference between revisions)
m (Protected "7f3n" [edit=sysop:move=sysop]) |
|||
(2 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Structure of PopP2 in apo form== | |
+ | <StructureSection load='7f3n' size='340' side='right'caption='[[7f3n]], [[Resolution|resolution]] 2.35Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[7f3n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ralstonia_solanacearum_GMI1000 Ralstonia solanacearum GMI1000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7F3N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7F3N FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.351856Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7f3n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7f3n OCA], [https://pdbe.org/7f3n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7f3n RCSB], [https://www.ebi.ac.uk/pdbsum/7f3n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7f3n ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q8Y125_RALSO Q8Y125_RALSO] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The Yersinia outer protein J (YopJ) family effectors are widely deployed through the type III secretion system by both plant and animal pathogens. As non-canonical acetyltransferases, the enzymatic activities of YopJ family effectors are allosterically activated by the eukaryote-specific ligand inositol hexaphosphate (InsP6). However, the underpinning molecular mechanism remains undefined. Here we present the crystal structure of apo-PopP2, a YopJ family member secreted by the plant pathogen Ralstonia solanacearum. Structural comparison of apo-PopP2 with the InsP6-bound PopP2 reveals a substantial conformational readjustment centered in the substrate-binding site. Combining biochemical and computational analyses, we further identify a mechanism by which the association of InsP6 with PopP2 induces an alpha-helix-to-beta-strand transition in the catalytic core, resulting in stabilization of the substrate recognition helix in the target protein binding site. Together, our study uncovers the molecular basis governing InsP6-mediated allosteric regulation of YopJ family acetyltransferases and further expands the paradigm of fold-switching proteins. | ||
- | + | Secondary-structure switch regulates the substrate binding of a YopJ family acetyltransferase.,Xia Y, Zou R, Escouboue M, Zhong L, Zhu C, Pouzet C, Wu X, Wang Y, Lv G, Zhou H, Sun P, Ding K, Deslandes L, Yuan S, Zhang ZM Nat Commun. 2021 Oct 13;12(1):5969. doi: 10.1038/s41467-021-26183-1. PMID:34645811<ref>PMID:34645811</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 7f3n" style="background-color:#fffaf0;"></div> |
- | [[Category: Xia | + | == References == |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Ralstonia solanacearum GMI1000]] | ||
+ | [[Category: Xia Y]] | ||
+ | [[Category: Zhang ZM]] |
Current revision
Structure of PopP2 in apo form
|