This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7m1l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:03, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7m1l' size='340' side='right'caption='[[7m1l]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='7m1l' size='340' side='right'caption='[[7m1l]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7m1l]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7M1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7M1L FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7m1l]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7M1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7M1L FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">clpP2, clpP, PAMH19_1747 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Endopeptidase_Clp Endopeptidase Clp], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.92 3.4.21.92] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7m1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7m1l OCA], [https://pdbe.org/7m1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7m1l RCSB], [https://www.ebi.ac.uk/pdbsum/7m1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7m1l ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7m1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7m1l OCA], [https://pdbe.org/7m1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7m1l RCSB], [https://www.ebi.ac.uk/pdbsum/7m1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7m1l ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/A0A0A8RGC1_PSEAI A0A0A8RGC1_PSEAI]] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.[HAMAP-Rule:MF_00444]
+
[https://www.uniprot.org/uniprot/CLPP2_PSEAE CLPP2_PSEAE] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.[HAMAP-Rule:MF_00444]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 22:
==See Also==
==See Also==
*[[Clp protease 3D structures|Clp protease 3D structures]]
*[[Clp protease 3D structures|Clp protease 3D structures]]
 +
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Endopeptidase Clp]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Baker, T A]]
+
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Grant, R A]]
+
[[Category: Baker TA]]
-
[[Category: Hall, B M]]
+
[[Category: Grant RA]]
-
[[Category: Sauer, R T]]
+
[[Category: Hall BM]]
-
[[Category: Hydrolase]]
+
[[Category: Sauer RT]]
-
[[Category: Petidase]]
+

Current revision

Crystal structure of Pseudomonas aeruginosa ClpP2

PDB ID 7m1l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools