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7r9e
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 7r9e is ON HOLD Authors: Description: Category: Unreleased Structures) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Methanococcus maripaludis chaperonin, open conformation 1== | |
| + | <StructureSection load='7r9e' size='340' side='right'caption='[[7r9e]], [[Resolution|resolution]] 4.00Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[7r9e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcus_maripaludis Methanococcus maripaludis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7R9E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7R9E FirstGlance]. <br> | ||
| + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7r9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7r9e OCA], [https://pdbe.org/7r9e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7r9e RCSB], [https://www.ebi.ac.uk/pdbsum/7r9e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7r9e ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q877G8_METMI Q877G8_METMI] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Chaperonins are homo- or hetero-oligomeric complexes that use ATP binding and hydrolysis to facilitate protein folding. ATP hydrolysis exhibits both positive and negative cooperativity. The mechanism by which chaperonins coordinate ATP utilization in their multiple subunits remains unclear. Here we use cryoEM to study ATP binding in the homo-oligomeric archaeal chaperonin from Methanococcus maripaludis (MmCpn), consisting of two stacked rings composed of eight identical subunits each. Using a series of image classification steps, we obtained different structural snapshots of individual chaperonins undergoing the nucleotide binding process. We identified nucleotide-bound and free states of individual subunits in each chaperonin, allowing us to determine the ATP occupancy state of each MmCpn particle. We observe distinctive tertiary and quaternary structures reflecting variations in nucleotide occupancy and subunit conformations in each chaperonin complex. Detailed analysis of the nucleotide distribution in each MmCpn complex indicates that individual ATP binding events occur in a statistically random manner for MmCpn, both within and across the rings. Our findings illustrate the power of cryoEM to characterize a biochemical property of multi-subunit ligand binding cooperativity at the individual particle level. | ||
| - | + | CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin.,Zhao Y, Schmid MF, Frydman J, Chiu W Nat Commun. 2021 Aug 6;12(1):4754. doi: 10.1038/s41467-021-25099-0. PMID:34362932<ref>PMID:34362932</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 7r9e" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Methanococcus maripaludis]] | ||
| + | [[Category: Chiu W]] | ||
| + | [[Category: Frydman J]] | ||
| + | [[Category: Schmid M]] | ||
| + | [[Category: Zhao Y]] | ||
Current revision
Methanococcus maripaludis chaperonin, open conformation 1
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