2vvy

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Current revision (05:33, 17 October 2024) (edit) (undo)
 
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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2vvy]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vaccinia_virus Vaccinia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VVY FirstGlance]. <br>
<table><tr><td colspan='2'>[[2vvy]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vaccinia_virus Vaccinia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VVY FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.693&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2vvx|2vvx]], [[2vvw|2vvw]], [[2i39|2i39]], [[2uxe|2uxe]], [[2jbx|2jbx]], [[2jby|2jby]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vvy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vvy OCA], [https://pdbe.org/2vvy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vvy RCSB], [https://www.ebi.ac.uk/pdbsum/2vvy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vvy ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vvy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vvy OCA], [https://pdbe.org/2vvy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vvy RCSB], [https://www.ebi.ac.uk/pdbsum/2vvy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vvy ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PG200_VACCW PG200_VACCW] Contributes to virulence by binding to the host IKBKB subunit of the IKK complex and preventing host NF-kappa-B activation in response to pro-inflammatory stimuli such as TNF-alpha or IL1B. Mechanistically, sterically hinders the direct contact between the kinase domains of IKBKB in the IKK complex containing IKBKB, CHUK/IKKA and NEMO (PubMed:29748387).<ref>PMID:21474453</ref> <ref>PMID:29748387</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vv/2vvy_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vv/2vvy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Vaccinia virus]]
[[Category: Vaccinia virus]]
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[[Category: Abrescia, N G.A]]
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[[Category: Abrescia NGA]]
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[[Category: Alderton, D]]
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[[Category: Alderton D]]
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[[Category: Bahar, M W]]
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[[Category: Bahar MW]]
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[[Category: Chen, R A.J]]
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[[Category: Chen RA-J]]
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[[Category: Cooray, S]]
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[[Category: Cooray S]]
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[[Category: Graham, S C]]
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[[Category: Graham SC]]
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[[Category: Grimes, J M]]
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[[Category: Grimes JM]]
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[[Category: Owens, R J]]
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[[Category: Owens RJ]]
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[[Category: Smith, G L]]
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[[Category: Smith GL]]
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[[Category: Stuart, D I]]
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[[Category: Stuart DI]]
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[[Category: Whalen, D M]]
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[[Category: Whalen DM]]
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[[Category: Bcl-2 family]]
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[[Category: Early protein]]
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[[Category: Host-virus interaction]]
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[[Category: Ikk]]
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[[Category: Ikk beta]]
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[[Category: Immunomodulator]]
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[[Category: Nf-kb activation]]
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[[Category: Viral protein]]
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Current revision

Structure of Vaccinia virus protein B14

PDB ID 2vvy

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Proteopedia Page Contributors and Editors (what is this?)

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