1d3u

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<StructureSection load='1d3u' size='340' side='right'caption='[[1d3u]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='1d3u' size='340' side='right'caption='[[1d3u]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1d3u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"pyrococcus_furiosus_subsp._woesei"_kanoksilapatham_et_al._2004 "pyrococcus furiosus subsp. woesei" kanoksilapatham et al. 2004]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D3U FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1d3u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_woesei Pyrococcus woesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D3U FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d3u OCA], [https://pdbe.org/1d3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d3u RCSB], [https://www.ebi.ac.uk/pdbsum/1d3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d3u ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d3u OCA], [https://pdbe.org/1d3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d3u RCSB], [https://www.ebi.ac.uk/pdbsum/1d3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d3u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/TF2B_PYRWO TF2B_PYRWO]] Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). [[https://www.uniprot.org/uniprot/TBP_PYRWO TBP_PYRWO]] General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
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[https://www.uniprot.org/uniprot/TBP_PYRWO TBP_PYRWO] General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/1d3u_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/1d3u_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Pyrococcus furiosus subsp. woesei kanoksilapatham et al. 2004]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Korkhin, Y]]
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[[Category: Pyrococcus woesei]]
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[[Category: Littlefield, O]]
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[[Category: Korkhin Y]]
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[[Category: Sigler, P B]]
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[[Category: Littlefield O]]
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[[Category: Gene regulation-dna complex]]
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[[Category: Sigler PB]]
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[[Category: Hyperthermophile]]
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[[Category: Protein-dna complex]]
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[[Category: Transcription]]
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Current revision

TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI

PDB ID 1d3u

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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