Exonuclease 3D structures

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Current revision (08:33, 4 June 2025) (edit) (undo)
 
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*ExN-V or RecBCD
*ExN-V or RecBCD
 +
**[[7lw7]] – hExN-V (mutant) <br />
**[[7lw8]], [[7lw9]], [[7lwa]] – hExN-V (mutant) + DNA – Cryo EM<br />
**[[7lw8]], [[7lw9]], [[7lwa]] – hExN-V (mutant) + DNA – Cryo EM<br />
**[[3e1s]] - EcExN-V RecD subunit<br />
**[[3e1s]] - EcExN-V RecD subunit<br />
-
**[[1w36]], [[3k70]] – EcExN-V RecB+RecC+RecD subunits + DNA hairpin<br />
+
**[[7mr0]], [[7mr1]], [[7mr2]], [[7mr4]] – EcExN-V RecB+RecC+RecD subunits – Cryo EM<br />
-
**[[5ld2]] – EcExN-V RecB+RecC+RecD subunits + DNA – Cryo EM<br />
+
**[[1w36]], [[3k70]] – EcExN-V RecB+RecC+RecD subunits + DNA hairpin
 +
**[[5ld2]], [[7mr3]] – EcExN-V RecB+RecC+RecD subunits + DNA – Cryo EM<br />
**[[5mbv]] – EcExN-V RecB+RecC+RecD subunits + GAMS – Cryo EM<br />
**[[5mbv]] – EcExN-V RecB+RecC+RecD subunits + GAMS – Cryo EM<br />
 +
**[[8b1r]] – EcExN-V RecB+RecC+RecD subunits + RecBCD inhibitor gene product – Cryo EM<br />
**[[6sjb]], [[6sje]], [[6sjf]], [[6sjg]], [[6t2u]], [[6t2v]] – EcExN-V RecB (mutant)+RecC+RecD subunits + DNA – Cryo EM<br />
**[[6sjb]], [[6sje]], [[6sjf]], [[6sjg]], [[6t2u]], [[6t2v]] – EcExN-V RecB (mutant)+RecC+RecD subunits + DNA – Cryo EM<br />
**[[3gp8]] - DrExN-V RecD subunit + DNA – ''Deinococcus radiodurans''<br />
**[[3gp8]] - DrExN-V RecD subunit + DNA – ''Deinococcus radiodurans''<br />
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**[[5ght]] – TkExN – ''Thermococcus kodakarensis''<br />
**[[5ght]] – TkExN – ''Thermococcus kodakarensis''<br />
**[[5ghs]], [[5ghr]] – TkExN + polypeptide<br />
**[[5ghs]], [[5ghr]] – TkExN + polypeptide<br />
 +
**[[7e15]] – TkExN + GINS51 + DNA polymerase II small subunit<br />
**[[5f54]] – DrExN + dTMP<br />
**[[5f54]] – DrExN + dTMP<br />
**[[5f55]] – DrExN + DNA<br />
**[[5f55]] – DrExN + DNA<br />
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*3'-5' ExN
*3'-5' ExN
-
**[[6sty]] – hExN REXO2 + RNA<br />
 
**[[4qoz]], [[4l8r]] – hExN + histone RNA hairpin-binding protein + RNA<br />
**[[4qoz]], [[4l8r]] – hExN + histone RNA hairpin-binding protein + RNA<br />
 +
**[[8zef]] – hExN DING + DNA<br />
 +
**[[8q1k]], [[8q1x]], [[8s86]] – hExN PLD3<br />
 +
**[[8v08]] – hExN PLD4 + ssDNA<br />
 +
**[[8v05]], [[8v07]], [[8v5t]] – mExN PLD3<br />
 +
**[[8v06]] – mExN PLD3 + ssDNA<br />
**[[4yor]], [[4yot]], [[4you]] – PhExN phoexo I – ''Pyrococcus horikoshii''<br />
**[[4yor]], [[4yot]], [[4you]] – PhExN phoexo I – ''Pyrococcus horikoshii''<br />
**[[4yov]], [[4yow]], [[4yox]], [[4yoy]] – PhExN phoexo I (mutant) + DNA<br />
**[[4yov]], [[4yow]], [[4yox]], [[4yoy]] – PhExN phoexo I (mutant) + DNA<br />
 +
**[[7t2s]] – EcExN <br />
 +
**[[9f7l]] – ExN + pGG – ''Bartonella henselae''<br />
*3’-5’ ExN oligoribonuclease (ORN)
*3’-5’ ExN oligoribonuclease (ORN)
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**[[6c34]], [[6c35]], [[6c36]] – MsExN (mutant)<br />
**[[6c34]], [[6c35]], [[6c36]] – MsExN (mutant)<br />
-
*ExN Trex
+
*ExN Trex or three-prime repair exonuclease 1
 +
**[[7tqn]], [[7tqo]], [[7tqp]] - hExN Trex1 (mutant)<br />
 +
**[[7tqq]] - hExN Trex1 + DNA<br />
 +
**[[8vl7]], [[9ava]], [[9o0w]], [[9o0x]], [[9o0y]] - hExN Trex1 + inhibitor<br />
**[[1y97]] – hExN Trex2<br />
**[[1y97]] – hExN Trex2<br />
**[[2o4g]] - mExN Trex1 + nucleotide – mouse<br />
**[[2o4g]] - mExN Trex1 + nucleotide – mouse<br />
-
**[[3mxj]] - mExN Trex1<br />
+
**[[2ioc]], [[3mxj]] - mExN Trex1<br />
**[[6w10]] - mExN Trex1 (mutant)<br />
**[[6w10]] - mExN Trex1 (mutant)<br />
**[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br />
**[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br />
**[[2oa8]], [[5ywv]], [[5ywu]], [[5ywt]], [[5yws]] - mExN Trex1 + DNA<br />
**[[2oa8]], [[5ywv]], [[5ywu]], [[5ywt]], [[5yws]] - mExN Trex1 + DNA<br />
 +
**[[8hcc]], [[8hcd]], [[8hce]], [[8hcf]] - mExN Trex1 + nucleotide
**[[4ynq]] - mExN Trex1 (mutant) + DNA<br />
**[[4ynq]] - mExN Trex1 (mutant) + DNA<br />
 +
**[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor
 +
**[[7u8y]] - mExN Trex1 + inhibitor<br />
 +
**[[8hch]] - mExN Trex1 + uridine<br />
**[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor<br />
**[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor<br />
**[[6a45]] - mExN Trex2<br />
**[[6a45]] - mExN Trex2<br />
**[[6a4b]], [[6a47]] - mExN Trex2 + DNA<br />
**[[6a4b]], [[6a47]] - mExN Trex2 + DNA<br />
**[[6a46]] - mExN Trex2 + nucleotide<br />
**[[6a46]] - mExN Trex2 + nucleotide<br />
 +
 +
*RNA ExN homolog or oligoribonuclease or REXO2
 +
 +
**[[6rci]] – hExN2<br />
 +
**[[6j7y]] – hExN2 + DNA<br />
 +
**[[6j80]], [[6rcn]] – hExN2 (mutant) + DNA<br />
 +
**[[6n6i]], [[6n6j]], [[6n6k]], [[6rcl]], [[6sty]] – hExN2 + RNA<br />
 +
**[[6j7z]] – hExN2 (mutant) + RNA<br />
*Other ExN
*Other ExN
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**[[5zyw]] – hExN mitochondrial genome repair 1<br />
**[[5zyw]] – hExN mitochondrial genome repair 1<br />
**[[5zyv]], [[5zyu]], [[5zyt]] – hExN mitochondrial genome repair 1 + DNA<br />
**[[5zyv]], [[5zyu]], [[5zyt]] – hExN mitochondrial genome repair 1 + DNA<br />
 +
**[[8q66]] – ExN Mut-7 + SH2 domain-containing protein – ''Caenorhabditis elegans''<br />
**[[3e2v]] – yExN <br />
**[[3e2v]] – yExN <br />
**[[2w45]] – H4ExN alkaline - Herpesvirus 4<br />
**[[2w45]] – H4ExN alkaline - Herpesvirus 4<br />
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**[[6m9k]] - ExN + recombination protein BET – Escherichia phage λ<br />
**[[6m9k]] - ExN + recombination protein BET – Escherichia phage λ<br />
**[[1ir6]], [[2zxo]], [[2zxp]], [[2zxr]] – ExN Recj – ''Thermus thermophiles''<br />
**[[1ir6]], [[2zxo]], [[2zxp]], [[2zxr]] – ExN Recj – ''Thermus thermophiles''<br />
 +
**[[8y30]] - ExN Recj – ''Staphylococcus aureus''
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D Structures of exonuclease

Updated on 04-June-2025

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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