1ew3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:07, 20 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ew3.gif|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF THE MAJOR HORSE ALLERGEN EQU C 1==
-
The line below this paragraph, containing "STRUCTURE_1ew3", creates the "Structure Box" on the page.
+
<StructureSection load='1ew3' size='340' side='right'caption='[[1ew3]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ew3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EW3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ew3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ew3 OCA], [https://pdbe.org/1ew3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ew3 RCSB], [https://www.ebi.ac.uk/pdbsum/1ew3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ew3 ProSAT]</span></td></tr>
-
{{STRUCTURE_1ew3| PDB=1ew3 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''CRYSTAL STRUCTURE OF THE MAJOR HORSE ALLERGEN EQU C 1'''
+
[https://www.uniprot.org/uniprot/ALL1_HORSE ALL1_HORSE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==Overview==
+
Check<jmol>
-
The three-dimensional structure of the major horse allergen Equ c 1 has been determined at 2.3 A resolution by x-ray crystallography. Equ c 1 displays the typical fold of lipocalins, a beta-barrel flanked by a C-terminal alpha-helix. The space between the two beta-sheets of the barrel defines an internal cavity that could serve, as in other lipocalins, for the binding and transport of small hydrophobic ligands. Equ c 1 crystallizes in a novel dimeric form, which is distinct from that observed in other lipocalin dimers and corresponds to the functional form of the allergen. Binding studies of point mutants of the allergen with specific monoclonal antibodies raised in mouse and IgE serum from horse allergic patients allowed to identify putative B cell antigenic determinants. In addition, total inhibition of IgE serum recognition by a single specific monoclonal antibody revealed the restricted nature of the IgE binding target on the molecular surface of Equ c 1.
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/1ew3_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
1EW3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EW3 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==Reference==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ew3 ConSurf].
-
Crystal structure of the allergen Equ c 1. A dimeric lipocalin with restricted IgE-reactive epitopes., Lascombe MB, Gregoire C, Poncet P, Tavares GA, Rosinski-Chupin I, Rabillon J, Goubran-Botros H, Mazie JC, David B, Alzari PM, J Biol Chem. 2000 Jul 14;275(28):21572-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10787420 10787420]
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Equus caballus]]
[[Category: Equus caballus]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Alzari, P M.]]
+
[[Category: Alzari PM]]
-
[[Category: David, B.]]
+
[[Category: David B]]
-
[[Category: Goubran-Botros, H.]]
+
[[Category: Goubran-Botros H]]
-
[[Category: Gregoire, C.]]
+
[[Category: Gregoire C]]
-
[[Category: Lascombe, M B.]]
+
[[Category: Lascombe MB]]
-
[[Category: Mazie, J C.]]
+
[[Category: Mazie JC]]
-
[[Category: Poncet, P.]]
+
[[Category: Poncet P]]
-
[[Category: Rabillon, J.]]
+
[[Category: Rabillon J]]
-
[[Category: Rosinski-Chupin, I.]]
+
[[Category: Rosinski-Chupin I]]
-
[[Category: Tavares, G A.]]
+
[[Category: Tavares GA]]
-
[[Category: Beta barrel]]
+
-
[[Category: Lipocalin]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 15:35:19 2008''
+

Current revision

CRYSTAL STRUCTURE OF THE MAJOR HORSE ALLERGEN EQU C 1

PDB ID 1ew3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ew3"
Personal tools