7n1h

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Current revision (06:35, 21 November 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7n1h is ON HOLD until Paper Publication
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==CryoEM structure of Venezuelan equine encephalitis virus VLP in complex with the LDLRAD3 receptor==
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<SX load='7n1h' size='340' side='right' viewer='molstar' caption='[[7n1h]], [[Resolution|resolution]] 4.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7n1h]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Venezuelan_equine_encephalitis_virus Venezuelan equine encephalitis virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7N1H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7N1H FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7n1h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7n1h OCA], [https://pdbe.org/7n1h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7n1h RCSB], [https://www.ebi.ac.uk/pdbsum/7n1h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7n1h ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LRAD3_MOUSE LRAD3_MOUSE] May influence APP processing, resulting in a decrease in sAPP-alpha production and increased amyloidogenic P3 peptide production (PubMed:21795536). May regulate ITCH and NEDD4 E3 ligase activity and degradation (By similarity).[UniProtKB:Q86YD5]<ref>PMID:21795536</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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LDLRAD3 is a recently defined attachment and entry receptor for Venezuelan equine encephalitis virus (VEEV)(1), a New World alphavirus that causes severe neurological disease in humans. Here we present near-atomic-resolution cryo-electron microscopy reconstructions of VEEV virus-like particles alone and in a complex with the ectodomains of LDLRAD3. Domain 1 of LDLRAD3 is a low-density lipoprotein receptor type-A module that binds to VEEV by wedging into a cleft created by two adjacent E2-E1 heterodimers in one trimeric spike, and engages domains A and B of E2 and the fusion loop in E1. Atomic modelling of this interface is supported by mutagenesis and anti-VEEV antibody binding competition assays. Notably, VEEV engages LDLRAD3 in a manner that is similar to the way that arthritogenic alphaviruses bind to the structurally unrelated MXRA8 receptor, but with a much smaller interface. These studies further elucidate the structural basis of alphavirus-receptor interactions, which could inform the development of therapies to mitigate infection and disease against multiple members of this family.
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Authors:
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Structure of Venezuelan equine encephalitis virus in complex with the LDLRAD3 receptor.,Basore K, Ma H, Kafai NM, Mackin S, Kim AS, Nelson CA, Diamond MS, Fremont DH Nature. 2021 Oct;598(7882):672-676. doi: 10.1038/s41586-021-03963-9. Epub 2021 , Oct 13. PMID:34646020<ref>PMID:34646020</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 7n1h" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: Venezuelan equine encephalitis virus]]
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[[Category: Basore K]]
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[[Category: Fremont DH]]
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[[Category: Nelson CA]]

Current revision

CryoEM structure of Venezuelan equine encephalitis virus VLP in complex with the LDLRAD3 receptor

7n1h, resolution 4.30Å

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