7pcm

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(New page: '''Unreleased structure''' The entry 7pcm is ON HOLD Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C. Description: BurG (holo) in complex with (Z)-2,3...)
Current revision (13:04, 1 February 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7pcm is ON HOLD
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==BurG (holo) in complex with (Z)-2,3-dihydroxy-6-methyl-hept-2-enoate (13): Biosynthesis of cyclopropanol rings in bacterial toxins==
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<StructureSection load='7pcm' size='340' side='right'caption='[[7pcm]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7pcm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_thailandensis_E264 Burkholderia thailandensis E264]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PCM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PCM FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7I3:(Z)-6-methyl-2,3-bis(oxidanyl)hept-2-enoic+acid'>7I3</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pcm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pcm OCA], [https://pdbe.org/7pcm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pcm RCSB], [https://www.ebi.ac.uk/pdbsum/7pcm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pcm ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q2T3G7_BURTA Q2T3G7_BURTA]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bacteria of the Burkholderia pseudomallei (BP) group pose a global health threat, causing the infectious diseases melioidosis, a common cause of pneumonia and sepsis, and glanders, a contagious zoonosis. A trait of BP bacteria is a conserved gene cluster coding for the biosynthesis of polyketides (malleicyprols) with a reactive cyclopropanol unit that is critical for virulence. Enzymes building this warhead represent ideal targets for antivirulence strategies but the biochemical basis of cyclopropanol formation is unknown. Here we describe the formation of the malleicyprol warhead. We show that BurG, an unusual NAD(+)-dependent member of the ketol-acid reductoisomerase family, constructs the strained cyclopropanol ring. Biochemical assays and a suite of eight crystal structures of native and mutated BurG with bound analogues and inhibitors provide snapshots of each step of the complex reaction mechanism, involving a concealed oxidoreduction and a C-S bond cleavage. Our findings illustrate a remarkable case of neofunctionalisation, where a biocatalyst from central metabolism has been evolutionarily repurposed for warhead production in pathogens.
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Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
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Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead.,Trottmann F, Ishida K, Ishida-Ito M, Kries H, Groll M, Hertweck C Nat Chem. 2022 Aug;14(8):884-890. doi: 10.1038/s41557-022-01005-z. Epub 2022 Jul , 29. PMID:35906404<ref>PMID:35906404</ref>
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Description: BurG (holo) in complex with (Z)-2,3-dihydroxy-6-methyl-hept-2-enoate (13): Biosynthesis of cyclopropanol rings in bacterial toxins
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Trottmann, F]]
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<div class="pdbe-citations 7pcm" style="background-color:#fffaf0;"></div>
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[[Category: Ishida, K]]
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[[Category: Hertweck, C]]
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==See Also==
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[[Category: Ishida, M]]
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*[[Ketol-acid reductoisomerase 3D structures|Ketol-acid reductoisomerase 3D structures]]
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[[Category: Groll, M]]
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== References ==
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[[Category: Kries, H]]
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Burkholderia thailandensis E264]]
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[[Category: Large Structures]]
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[[Category: Groll M]]
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[[Category: Hertweck C]]
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[[Category: Ishida K]]
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[[Category: Ishida M]]
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[[Category: Kries H]]
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[[Category: Trottmann F]]

Current revision

BurG (holo) in complex with (Z)-2,3-dihydroxy-6-methyl-hept-2-enoate (13): Biosynthesis of cyclopropanol rings in bacterial toxins

PDB ID 7pcm

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