7lkq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:52, 18 October 2023) (edit) (undo)
 
Line 1: Line 1:
-
====
+
==The PilZ(delta107-117)-FimX(GGDEF-EAL) complex from Xanthomonas citri==
-
<StructureSection load='7lkq' size='340' side='right'caption='[[7lkq]]' scene=''>
+
<StructureSection load='7lkq' size='340' side='right'caption='[[7lkq]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7lkq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_citri_pv._citri_str._306 Xanthomonas citri pv. citri str. 306]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LKQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LKQ FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lkq OCA], [https://pdbe.org/7lkq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lkq RCSB], [https://www.ebi.ac.uk/pdbsum/7lkq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lkq ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lkq OCA], [https://pdbe.org/7lkq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lkq RCSB], [https://www.ebi.ac.uk/pdbsum/7lkq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lkq ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8PJX9_XANAC Q8PJX9_XANAC]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Type IV pili (T4P) are thin and flexible filaments found on the surface of a wide range of Gram-negative bacteria that undergo cycles of extension and retraction and participate in a variety of important functions related to lifestyle, defense and pathogenesis. During pilus extensions, the PilB ATPase energizes the polymerization of pilin monomers from the inner membrane. In Xanthomonas citri, two cytosolic proteins, PilZ and the c-di-GMP receptor FimX, are involved in the regulation of T4P biogenesis through interactions with PilB. In vivo fluorescence microscopy studies show that PilB, PilZ and FimX all colocalize to the leading poles of X. citri cells during twitching motility and that this colocalization is dependent on the presence of all three proteins. We demonstrate that full-length PilB, PilZ and FimX can interact to form a stable complex as can PilB N-terminal, PilZ and FimX C-terminal fragments. We present the crystal structures of two binary complexes: i) that of the PilB N-terminal domain, encompassing sub-domains ND0 and ND1, bound to PilZ and ii) PilZ bound to the FimX EAL domain within a larger fragment containing both GGDEF and EAL domains. Evaluation of PilZ interactions with PilB and the FimX EAL domain in these and previously published structures, in conjunction with mutagenesis studies and functional assays, allow us to propose an internally consistent model for the PilB-PilZ-FimX complex and its interactions with the PilM-PilN complex in the context of the inner membrane platform of the X. citri Type IV pilus.
 +
 +
The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.,Llontop EE, Cenens W, Favaro DC, Sgro GG, Salinas RK, Guzzo CR, Farah CS PLoS Pathog. 2021 Aug 16;17(8):e1009808. doi: 10.1371/journal.ppat.1009808. , eCollection 2021 Aug. PMID:34398935<ref>PMID:34398935</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7lkq" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Dual specificity protein kinase 3D structures|Dual specificity protein kinase 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Z-disk]]
+
[[Category: Xanthomonas citri pv. citri str. 306]]
 +
[[Category: Farah CS]]
 +
[[Category: Guzzo CR]]
 +
[[Category: Llontop EE]]

Current revision

The PilZ(delta107-117)-FimX(GGDEF-EAL) complex from Xanthomonas citri

PDB ID 7lkq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools