6z1l
From Proteopedia
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==A de novo Enzyme for the Morita-Baylis-Hillman Reaction BH32.12== | ==A de novo Enzyme for the Morita-Baylis-Hillman Reaction BH32.12== | ||
- | <StructureSection load='6z1l' size='340' side='right'caption='[[6z1l]]' scene=''> | + | <StructureSection load='6z1l' size='340' side='right'caption='[[6z1l]], [[Resolution|resolution]] 2.29Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Z1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Z1L FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6z1l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Z1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Z1L FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6z1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6z1l OCA], [https://pdbe.org/6z1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6z1l RCSB], [https://www.ebi.ac.uk/pdbsum/6z1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6z1l ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6z1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6z1l OCA], [https://pdbe.org/6z1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6z1l RCSB], [https://www.ebi.ac.uk/pdbsum/6z1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6z1l ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The combination of computational design and directed evolution could offer a general strategy to create enzymes with new functions. So far, this approach has delivered enzymes for a handful of model reactions. Here we show that new catalytic mechanisms can be engineered into proteins to accelerate more challenging chemical transformations. Evolutionary optimization of a primitive design afforded an efficient and enantioselective enzyme (BH32.14) for the Morita-Baylis-Hillman (MBH) reaction. BH32.14 is suitable for preparative-scale transformations, accepts a broad range of aldehyde and enone coupling partners and is able to promote selective monofunctionalizations of dialdehydes. Crystallographic, biochemical and computational studies reveal that BH32.14 operates via a sophisticated catalytic mechanism comprising a His23 nucleophile paired with a judiciously positioned Arg124. This catalytic arginine shuttles between conformational states to stabilize multiple oxyanion intermediates and serves as a genetically encoded surrogate of privileged bidentate hydrogen-bonding catalysts (for example, thioureas). This study demonstrates that elaborate catalytic devices can be built from scratch to promote demanding multi-step processes not observed in nature. | ||
+ | |||
+ | Engineering an efficient and enantioselective enzyme for the Morita-Baylis-Hillman reaction.,Crawshaw R, Crossley AE, Johannissen L, Burke AJ, Hay S, Levy C, Baker D, Lovelock SL, Green AP Nat Chem. 2021 Dec 16. pii: 10.1038/s41557-021-00833-9. doi:, 10.1038/s41557-021-00833-9. PMID:34916595<ref>PMID:34916595</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6z1l" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
+ | [[Category: Synthetic construct]] | ||
[[Category: Levy CW]] | [[Category: Levy CW]] |
Current revision
A de novo Enzyme for the Morita-Baylis-Hillman Reaction BH32.12
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