7bnk
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==Crystal structure of ParB from Myxococcus xanthus bound to CDP and Monothiophosphate== | ==Crystal structure of ParB from Myxococcus xanthus bound to CDP and Monothiophosphate== | ||
- | <StructureSection load='7bnk' size='340' side='right'caption='[[7bnk]]' scene=''> | + | <StructureSection load='7bnk' size='340' side='right'caption='[[7bnk]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BNK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BNK FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7bnk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Myxococcus_xanthus_DK_1622 Myxococcus xanthus DK 1622]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BNK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BNK FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bnk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bnk OCA], [https://pdbe.org/7bnk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bnk RCSB], [https://www.ebi.ac.uk/pdbsum/7bnk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bnk ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CDP:CYTIDINE-5-DIPHOSPHATE'>CDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TS6:MONOTHIOPHOSPHATE'>TS6</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bnk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bnk OCA], [https://pdbe.org/7bnk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bnk RCSB], [https://www.ebi.ac.uk/pdbsum/7bnk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bnk ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q1CVJ4_MYXXD Q1CVJ4_MYXXD] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | ParB-like CTPases mediate the segregation of bacterial chromosomes and low-copy number plasmids. They act as DNA-sliding clamps that are loaded at parS motifs in the centromere of target DNA molecules and spread laterally to form large nucleoprotein complexes serving as docking points for the DNA segregation machinery. Here, we solve crystal structures of ParB in the pre- and post-hydrolysis state and illuminate the catalytic mechanism of nucleotide hydrolysis. Moreover, we identify conformational changes that underlie the CTP- and parS-dependent closure of ParB clamps. The study of CTPase-deficient ParB variants reveals that CTP hydrolysis serves to limit the sliding time of ParB clamps and thus drives the establishment of a well-defined ParB diffusion gradient across the centromere whose dynamics are critical for DNA segregation. These findings clarify the role of the ParB CTPase cycle in partition complex assembly and function and thus advance our understanding of this prototypic CTP-dependent molecular switch. | ||
+ | |||
+ | The CTPase activity of ParB determines the size and dynamics of prokaryotic DNA partition complexes.,Osorio-Valeriano M, Altegoer F, Das CK, Steinchen W, Panis G, Connolley L, Giacomelli G, Feddersen H, Corrales-Guerrero L, Giammarinaro PI, Hanssmann J, Bramkamp M, Viollier PH, Murray S, Schafer LV, Bange G, Thanbichler M Mol Cell. 2021 Sep 18. pii: S1097-2765(21)00738-3. doi:, 10.1016/j.molcel.2021.09.004. PMID:34562373<ref>PMID:34562373</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7bnk" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
+ | [[Category: Myxococcus xanthus DK 1622]] | ||
[[Category: Altegoer F]] | [[Category: Altegoer F]] | ||
[[Category: Bange G]] | [[Category: Bange G]] |
Current revision
Crystal structure of ParB from Myxococcus xanthus bound to CDP and Monothiophosphate
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