Sandbox Reserved 1696

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(New page: {{Sandbox_Reserved_BHall_F21}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE --> ==Your Heading Here (maybe something like 'Structure')== <StructureSection load='1stp' size='340' side='right' cap...)
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{{Sandbox_Reserved_BHall_F21}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
{{Sandbox_Reserved_BHall_F21}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
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==Your Heading Here (maybe something like 'Structure')==
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==Inositol polyphosphate 1-phosphatase==
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<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
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<StructureSection load='1iep' size='340' side='right' caption='Abl kinase' scene=''>
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This is a default text for your page ''''''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
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This is a default text for your page '''Sandbox 1677'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
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== Function ==
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== Function of your protein ==
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== Disease ==
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== Biological relevance and broader implications ==
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== Relevance ==
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== Important amino acids==
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<scene name='89/892739/Amino_acids_300-304/3'>Amino acids 300-304</scene> <scene name='89/892739/Amino_acids_300-304/3'>Text To Be Displayed</scene>are an important part of the drug binding site <ref>PMID:33172890</ref>.
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The protein 1INP does not have a ligand, however, in the paper, the crystalline study shows other similar proteins, protein such as 7KIR, has similar catalytic amino acids.
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The catalytic amino acids are glutamic acid, and aspartic acid, the enzyme had a mutation at DD54, which causes the alanine changed to aspartic acid.
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The protein has catalytic amino acid, such as Thr 312, LYS 270, Ser 268, Glu 269, Ser 157, Asp 156, Thr 158, Ala 291, and Thr 313.All these proteins are involved in hydrogen bond to the ligand.
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Catalytic amino acids in an enzyme are located in the active center responsible for accelerating enzyme catalyzed reactions, catalytic triads are a set of three coordinated amino acids that can be found in the active site of some enzymes.
== Structural highlights ==
== Structural highlights ==
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<scene name='89/892739/Protine_1inp/2'>Text To Be Displayed</scene>
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== Other important features ==
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Other features includes, mutations of D54 results in loss of INPP1 activity without changing the substrate affinity, the D54 mutant are known to trap the substrate in INPP1.
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Substrate binding is largely contributed by extensive interactions involving the 1-PO4 and 4-PO4 groups. For 1-PO4, one oxygen serves as ligand for both CA1 AND CA2; another oxygen forms hydrogen bonds with main chain amide groups of S157 and T158 residues in the "DPIDST" motif.
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
</StructureSection>
</StructureSection>
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== References ==
== References ==
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<references/>
<references/>

Current revision


This Sandbox is Reserved from 10/01/2021 through 01/01//2022 for use in Biochemistry taught by Bonnie Hall at Grand View University, Des Moines, USA. This reservation includes Sandbox Reserved 1690 through Sandbox Reserved 1699.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Inositol polyphosphate 1-phosphatase

Abl kinase

Drag the structure with the mouse to rotate


References

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
  3. Dollins DE, Xiong JP, Endo-Streeter S, Anderson DE, Bansal VS, Ponder JW, Ren Y, York JD. A Structural Basis for Lithium and Substrate Binding of an Inositide Phosphatase. J Biol Chem. 2020 Nov 10. pii: RA120.014057. doi: 10.1074/jbc.RA120.014057. PMID:33172890 doi:http://dx.doi.org/10.1074/jbc.RA120.014057
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