This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7s9z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 7s9z is ON HOLD Authors: Mendez, D.L., Lowder, E.P., Tillman, D.E., Sutherland, M.C., Collier, A.L., Rau, M.J., Fitzpatrick, J.A., Kranz, R.G. Desc...)
Current revision (10:46, 5 January 2022) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 7s9z is ON HOLD
+
==Helicobacter Hepaticus CcsBA Closed Conformation==
 +
<StructureSection load='7s9z' size='340' side='right'caption='[[7s9z]], [[Resolution|resolution]] 4.14&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[7s9z]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7S9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7S9Z FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEB:HEME+B/C'>HEB</scene>, <scene name='pdbligand=PTY:PHOSPHATIDYLETHANOLAMINE'>PTY</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7s9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7s9z OCA], [https://pdbe.org/7s9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7s9z RCSB], [https://www.ebi.ac.uk/pdbsum/7s9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7s9z ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Although the individual structures and respiratory functions of cytochromes are well studied, the structural basis for their assembly, including transport of heme for attachment, are unknown. We describe cryo-electron microscopy (cryo-EM) structures of CcsBA, a bifunctional heme transporter and cytochrome c (cyt c) synthase. Models built from the cryo-EM densities show that CcsBA is trapped with heme in two conformations, herein termed the closed and open states. The closed state has heme located solely at a transmembrane (TM) site, with a large periplasmic domain oriented such that access of heme to the cytochrome acceptor is denied. The open conformation contains two heme moieties, one in the TM-heme site and another in an external site (P-heme site). The presence of heme in the periplasmic site at the base of a chamber induces a large conformational shift that exposes the heme for reaction with apocytochrome c (apocyt c). Consistent with these structures, in vivo and in vitro cyt c synthase studies suggest a mechanism for transfer of the periplasmic heme to cytochrome.
-
Authors: Mendez, D.L., Lowder, E.P., Tillman, D.E., Sutherland, M.C., Collier, A.L., Rau, M.J., Fitzpatrick, J.A., Kranz, R.G.
+
Cryo-EM of CcsBA reveals the basis for cytochrome c biogenesis and heme transport.,Mendez DL, Lowder EP, Tillman DE, Sutherland MC, Collier AL, Rau MJ, Fitzpatrick JAJ, Kranz RG Nat Chem Biol. 2022 Jan;18(1):101-108. doi: 10.1038/s41589-021-00935-y. Epub 2021, Dec 20. PMID:34931065<ref>PMID:34931065</ref>
-
Description: Helicobacter Hepaticus CcsBA Closed Conformation
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Kranz, R.G]]
+
<div class="pdbe-citations 7s9z" style="background-color:#fffaf0;"></div>
-
[[Category: Collier, A.L]]
+
== References ==
-
[[Category: Fitzpatrick, J.A]]
+
<references/>
-
[[Category: Mendez, D.L]]
+
__TOC__
-
[[Category: Rau, M.J]]
+
</StructureSection>
-
[[Category: Lowder, E.P]]
+
[[Category: Large Structures]]
-
[[Category: Sutherland, M.C]]
+
[[Category: Collier, A L]]
-
[[Category: Tillman, D.E]]
+
[[Category: Fitzpatrick, J A]]
 +
[[Category: Kranz, R G]]
 +
[[Category: Lowder, E P]]
 +
[[Category: Mendez, D L]]
 +
[[Category: Rau, M J]]
 +
[[Category: Sutherland, M C]]
 +
[[Category: Tillman, D E]]
 +
[[Category: Cytochrome c biogenesis]]
 +
[[Category: Heme lyase]]
 +
[[Category: Heme transporter]]
 +
[[Category: Membrane protein]]

Current revision

Helicobacter Hepaticus CcsBA Closed Conformation

PDB ID 7s9z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools