1tzq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:32, 21 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1tzq' size='340' side='right'caption='[[1tzq]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='1tzq' size='340' side='right'caption='[[1tzq]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1tzq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acteq Acteq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TZQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TZQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1tzq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinia_equina Actinia equina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TZQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TZQ FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1iaz|1iaz]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tzq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tzq OCA], [https://pdbe.org/1tzq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tzq RCSB], [https://www.ebi.ac.uk/pdbsum/1tzq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tzq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tzq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tzq OCA], [https://pdbe.org/1tzq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tzq RCSB], [https://www.ebi.ac.uk/pdbsum/1tzq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tzq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ACTP2_ACTEQ ACTP2_ACTEQ]] Pore-forming protein that forms cations-selective hydrophilic pores of around 1 nm and causes cardiac stimulation and hemolysis. Pore formation is a multi-step process that involves specific recognition of membrane sphingomyelin (but neither cholesterol nor phosphatidylcholine) using aromatic rich region and adjacent phosphocholine (POC) binding site, firm binding to the membrane (mainly driven by hydrophobic interactions) accompanied by the transfer of the N-terminal region to the lipid-water interface and finally pore formation after oligomerization of several monomers. Cytolytic effects include red blood cells hemolysis, platelet aggregation and lysis, cytotoxic and cytostatic effects on fibroblasts. Lethality in mammals has been ascribed to severe vasospasm of coronary vessels, cardiac arrhythmia, and inotropic effects.
+
[https://www.uniprot.org/uniprot/ACTP2_ACTEQ ACTP2_ACTEQ] Pore-forming protein that forms cations-selective hydrophilic pores of around 1 nm and causes cardiac stimulation and hemolysis. Pore formation is a multi-step process that involves specific recognition of membrane sphingomyelin (but neither cholesterol nor phosphatidylcholine) using aromatic rich region and adjacent phosphocholine (POC) binding site, firm binding to the membrane (mainly driven by hydrophobic interactions) accompanied by the transfer of the N-terminal region to the lipid-water interface and finally pore formation after oligomerization of several monomers. Cytolytic effects include red blood cells hemolysis, platelet aggregation and lysis, cytotoxic and cytostatic effects on fibroblasts. Lethality in mammals has been ascribed to severe vasospasm of coronary vessels, cardiac arrhythmia, and inotropic effects.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 14:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tz/1tzq_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tz/1tzq_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 35: Line 35:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Acteq]]
+
[[Category: Actinia equina]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Anderluh, G]]
+
[[Category: Anderluh G]]
-
[[Category: Gonzalez-Maas, J M]]
+
[[Category: Gonzalez-Maas JM]]
-
[[Category: Guncar, G]]
+
[[Category: Guncar G]]
-
[[Category: Gutirrez-Aguirre, I]]
+
[[Category: Gutirrez-Aguirre I]]
-
[[Category: Hojnik, V]]
+
[[Category: Hojnik V]]
-
[[Category: Kristan, K]]
+
[[Category: Kristan K]]
-
[[Category: Lakey, J H]]
+
[[Category: Lakey JH]]
-
[[Category: Podlesek, Z]]
+
[[Category: Podlesek Z]]
-
[[Category: Turk, D A]]
+
[[Category: Turk DA]]
-
[[Category: Beta-sandwich]]
+
-
[[Category: Toxin]]
+

Current revision

Crystal structure of the equinatoxin II 8-69 double cysteine mutant

PDB ID 1tzq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools