This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Importin 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:10, 29 May 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 7: Line 7:
**[[1ial]] – mIPO NLS-binding domain – mouse<br />
**[[1ial]] – mIPO NLS-binding domain – mouse<br />
-
**[[1bk5]] – yIPO NLS-binding domain - yeast<br />
+
**[[6d7m]] – mIPO (mutant)<br />
**[[4tnm]] – IPO armadillo repeat domain – ''Arabidopsis thaliana''<br />
**[[4tnm]] – IPO armadillo repeat domain – ''Arabidopsis thaliana''<br />
 +
**[[1bk5]] – yIPO NLS-binding domain - yeast<br />
 +
**[[7vps]] – NgIPO ARM domain 75-516 – ''Nakaceomyces glabratus''<br />
*''IPO-α complex with NLS peptide''
*''IPO-α complex with NLS peptide''
Line 25: Line 27:
**[[4rxh]] – NcIPO NLS-binding domain + SV40 large T antigen – ''Neurospora crassa''<br />
**[[4rxh]] – NcIPO NLS-binding domain + SV40 large T antigen – ''Neurospora crassa''<br />
**[[5vqi]] – NcIPO NLS-binding domain + NIT2<br />
**[[5vqi]] – NcIPO NLS-binding domain + NIT2<br />
 +
**[[7vpt]] – NgIPO ARM domain + Upc2<br />
*''IPO-α complex with protein''
*''IPO-α complex with protein''
Line 34: Line 37:
*IPO-α 1
*IPO-α 1
-
**[[3wpt]] – hIPO NLS-binding domain - human<br />
+
**[[3wpt]], [[8fzk]] – hIPO NLS-binding domain - human<br />
**[[4b8j]] – rIPO <br />
**[[4b8j]] – rIPO <br />
**[[6bvt]] – mIPO NLS-binding domain <br />
**[[6bvt]] – mIPO NLS-binding domain <br />
**[[4u5v]], [[4u5u]], [[4u5s]], [[4u5o]], [[4u5n]], [[4u5l]], [[4u58]], [[4u54]] – mIPO NLS-binding domain + inhibitor<br />
**[[4u5v]], [[4u5u]], [[4u5s]], [[4u5o]], [[4u5n]], [[4u5l]], [[4u58]], [[4u54]] – mIPO NLS-binding domain + inhibitor<br />
-
**[[7s1e]] – IPO – guinea pig<br />
+
**[[8g4j]] – IPO – guinea pig<br />
*''IPO-α 1 complex with NLS peptide''
*''IPO-α 1 complex with NLS peptide''
Line 47: Line 50:
**[[6bw1]] – hIPO NLS-binding domain + Hendra virus peptide<br />
**[[6bw1]] – hIPO NLS-binding domain + Hendra virus peptide<br />
**[[5w4e]], [[5w4f]], [[5w4g]] – hIPO NLS-binding domain + polymerase peptide<br />
**[[5w4e]], [[5w4f]], [[5w4g]] – hIPO NLS-binding domain + polymerase peptide<br />
 +
**[[7n9h]] – hIPO NLS-binding domain + TDP-43 peptide<br />
 +
**[[7cru]] – hIPO NLS-binding domain + hnRNPK peptide<br />
 +
**[[8he3]] – hIPO NLS-binding domain + HIF-1 peptide<br />
**[[7n8j]] – hIPO NLS-binding domain + BIMAX peptide<br />
**[[7n8j]] – hIPO NLS-binding domain + BIMAX peptide<br />
**[[5h43]] – hIPO NLS-binding domain + histone acetyltransferase KAT8<br />
**[[5h43]] – hIPO NLS-binding domain + histone acetyltransferase KAT8<br />
 +
**[[8gai]] – IPO NLS-binding domain + BIMAX peptide – guinea pig<br />
**[[4mz5]], [[4mz6]] – mIPO NLS-binding domain 70-528 + dUTPase<br />
**[[4mz5]], [[4mz6]] – mIPO NLS-binding domain 70-528 + dUTPase<br />
**[[4oih]] – mIPO NLS-binding domain + guanine nucleotide exchange factor SRM1<br />
**[[4oih]] – mIPO NLS-binding domain + guanine nucleotide exchange factor SRM1<br />
Line 58: Line 65:
**[[5ekg]], [[5ekf]], [[5e6q]] – mIPO NLS-binding domain + XPG2<br />
**[[5ekg]], [[5ekf]], [[5e6q]] – mIPO NLS-binding domain + XPG2<br />
**[[5d5k]] – mIPO NLS-binding domain + PARP 2<br />
**[[5d5k]] – mIPO NLS-binding domain + PARP 2<br />
-
**[[7l04]] – mIPO NLS-binding domain + adeno-associated virus<br />
+
**[[7l04]], [[8fk3]] – mIPO NLS-binding domain + adeno-associated virus<br />
**[[5ctt]] – mIPO NLS-binding domain + SART3/TIP110<br />
**[[5ctt]] – mIPO NLS-binding domain + SART3/TIP110<br />
**[[5b56]] – mIPO NLS-binding domain + HIV-1 VPR<br />
**[[5b56]] – mIPO NLS-binding domain + HIV-1 VPR<br />
Line 67: Line 74:
**[[6iu7]], [[6iua]] – mIPO NLS-binding domain + TP53-binding protein <br />
**[[6iu7]], [[6iua]] – mIPO NLS-binding domain + TP53-binding protein <br />
**[[5w41]] – mIPO NLS-binding domain + Zika virus peptide <br />
**[[5w41]] – mIPO NLS-binding domain + Zika virus peptide <br />
 +
**[[8fua]], [[8fuc]] – mIPO NLS-binding domain + Hendra virus peptide<br />
 +
**[[8ech]] – mIPO NLS-binding domain + tick-bourne encephalitis virus<br />
**[[5v5o]], [[5v5p]] – mIPO NLS-binding domain + influenza virus peptide <br />
**[[5v5o]], [[5v5p]] – mIPO NLS-binding domain + influenza virus peptide <br />
**[[5umz]] – mIPO NLS-binding domain + TNRC6A peptide <br />
**[[5umz]] – mIPO NLS-binding domain + TNRC6A peptide <br />
Line 78: Line 87:
**[[7jjm]], [[7jk7]] – mIPO NLS-binding domain + LSD1 peptide <br />
**[[7jjm]], [[7jk7]] – mIPO NLS-binding domain + LSD1 peptide <br />
**[[7jvo]] – mIPO NLS-binding domain + ACE2 peptide <br />
**[[7jvo]] – mIPO NLS-binding domain + ACE2 peptide <br />
 +
**[[8he0]] – mIPO NLS-binding domain + HIF-1 peptide<br />
**[[7rg4]], [[7rg5]] – mIPO NLS-binding domain + p50 peptide <br />
**[[7rg4]], [[7rg5]] – mIPO NLS-binding domain + p50 peptide <br />
**[[6wx7]] – mIPO NLS-binding domain + SOX2 peptide <br />
**[[6wx7]] – mIPO NLS-binding domain + SOX2 peptide <br />
Line 105: Line 115:
**[[1y2a]], [[3q5u]] – mIPO NLS-binding domain + phospholipid scramblase <br />
**[[1y2a]], [[3q5u]] – mIPO NLS-binding domain + phospholipid scramblase <br />
**[[2c1m]] – mIPO NLS-binding domain + Nup50<br />
**[[2c1m]] – mIPO NLS-binding domain + Nup50<br />
 +
**[[7leq]] – mIPO NLS-binding domain + p50<br />
 +
**[[7leu]] – mIPO NLS-binding domain + p65<br />
**[[3btr]] – mIPO NLS-binding domain + androgen receptor<br />
**[[3btr]] – mIPO NLS-binding domain + androgen receptor<br />
**[[3knd]] – mIPO NLS-binding domain + targeting protein for KXLP2<br />
**[[3knd]] – mIPO NLS-binding domain + targeting protein for KXLP2<br />
Line 113: Line 125:
**[[3tpm]] – mIPO NLS-binding domain + MAL<br />
**[[3tpm]] – mIPO NLS-binding domain + MAL<br />
**[[3ve6]] – mIPO NLS-binding domain + Venezuelan equine encephalitis virus<br />
**[[3ve6]] – mIPO NLS-binding domain + Venezuelan equine encephalitis virus<br />
 +
**[[8f2q]] – mIPO NLS-binding domain + parvovirus<br />
**[[3uvu]] – mIPO NLS-binding domain + flap endonuclease<br />
**[[3uvu]] – mIPO NLS-binding domain + flap endonuclease<br />
**[[3ukw]], [[3ukx]] – mIPO NLS-binding domain + BIMAX<br />
**[[3ukw]], [[3ukx]] – mIPO NLS-binding domain + BIMAX<br />
Line 135: Line 148:
**[[6bvv]] – hIPO NLS-binding domain + Nipa virus peptide<br />
**[[6bvv]] – hIPO NLS-binding domain + Nipa virus peptide<br />
**[[5xzx]] – hIPO NLS-binding domain + RAN-binding protein peptide<br />
**[[5xzx]] – hIPO NLS-binding domain + RAN-binding protein peptide<br />
 +
**[[8hkw]] – hIPO NLS-binding domain + 53BP1 peptide<br />
**[[5tbk]] – hIPO NLS-binding domain + regulator of chromosome condensation <br />
**[[5tbk]] – hIPO NLS-binding domain + regulator of chromosome condensation <br />
**[[7rfy]] – hIPO + ORF4b<br />
**[[7rfy]] – hIPO + ORF4b<br />
**[[6wx8]] – hIPO + SOX2<br />
**[[6wx8]] – hIPO + SOX2<br />
 +
**[[7lfc]] – hIPO + p50 NLS<br />
 +
**[[7lf4]] – hIPO + p50 NLS + p65 NLS<br />
 +
**[[8fub]] – hIPO NLS-binding domain + Hendra virus peptide<br />
 +
**[[8fzm]] – mIPO NLS-binding domain + BIMAX<br />
 +
**[[7let]] – mIPO + p50 NLS + p65 NLS<br />
*IPO-α 5
*IPO-α 5
Line 149: Line 168:
*IPO-α 7
*IPO-α 7
 +
**[[7rht]] – hIPO <br />
**[[4uad]] – hIPO NLS-binding domain + influenza RNA polymerase<br />
**[[4uad]] – hIPO NLS-binding domain + influenza RNA polymerase<br />
*IPO-β
*IPO-β
-
**[[4xrk]] – IPO – ''Chaetomium thermophilum'' <br />
+
**[[4xri]], [[4xrk]] – IPO – ''Chaetomium thermophilum'' <br />
*IPO-β 1 (karyopherin β 1)
*IPO-β 1 (karyopherin β 1)
Line 207: Line 227:
**[[7jjl]] – hIPO + LSD1 peptide <br />
**[[7jjl]] – hIPO + LSD1 peptide <br />
 +
 +
*IPO-4
 +
 +
**[[8dyo]] – hIPO + RanGTP – Cryo EM<br />
 +
**[[7unk]] – hIPO + H3 + H4 + ASF1 – Cryo EM<br />
*IPO-4B
*IPO-4B
Line 230: Line 255:
**[[4c0o]] – hIPO + serine/arginine-rich splicing factor<br />
**[[4c0o]] – hIPO + serine/arginine-rich splicing factor<br />
**[[4c0q]], [[4ol0]] – hIPO + GTPase Ran<br />
**[[4c0q]], [[4ol0]] – hIPO + GTPase Ran<br />
 +
**[[6gx9]] – hIPO + CPSF 68<br />
*IPO-13 (karyopherin 13)
*IPO-13 (karyopherin 13)

Current revision

3D structures of importin

Updated on 29-May-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

Personal tools