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6yi7

From Proteopedia

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Current revision (13:27, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6yi7' size='340' side='right'caption='[[6yi7]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
<StructureSection load='6yi7' size='340' side='right'caption='[[6yi7]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6yi7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Blood_fluke Blood fluke]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YI7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YI7 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6yi7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Schistosoma_mansoni Schistosoma mansoni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YI7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YI7 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ORW:1-[(2~{S})-1-[[iminomethyl(methyl)amino]-methyl-amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-(phenylmethyl)urea'>ORW</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.29&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3s3q|3s3q]], [[3s3r|3s3r]], [[3qsd|3qsd]], [[5ogr|5ogr]], [[5ogq|5ogq]], [[4i07|4i07]], [[4i05|4i05]], [[4i04|4i04]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ORW:1-[(2~{S})-1-[[iminomethyl(methyl)amino]-methyl-amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-(phenylmethyl)urea'>ORW</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cb1.1, Smp_103610 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6183 Blood fluke])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yi7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yi7 OCA], [https://pdbe.org/6yi7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yi7 RCSB], [https://www.ebi.ac.uk/pdbsum/6yi7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yi7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yi7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yi7 OCA], [https://pdbe.org/6yi7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yi7 RCSB], [https://www.ebi.ac.uk/pdbsum/6yi7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yi7 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8MNY2_SCHMA Q8MNY2_SCHMA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Blood fluke]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Fanfrlik, J]]
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[[Category: Schistosoma mansoni]]
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[[Category: Guetschow, M]]
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[[Category: Fanfrlik J]]
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[[Category: Jilkova, A]]
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[[Category: Guetschow M]]
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[[Category: Mares, M]]
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[[Category: Jilkova A]]
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[[Category: Pachl, P]]
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[[Category: Mares M]]
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[[Category: Rezacova, P]]
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[[Category: Pachl P]]
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[[Category: Rubesova, P]]
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[[Category: Rezacova P]]
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[[Category: Azanitrile]]
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[[Category: Rubesova P]]
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[[Category: Cysteine protease]]
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[[Category: Hydrolase]]
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[[Category: Inhibitor]]
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[[Category: Parasite]]
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Current revision

Structure of cathepsin B1 from Schistosoma mansoni (SmCB1) in complex with an azanitrile inhibitor

PDB ID 6yi7

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