1z1y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:19, 26 March 2025) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1z1y' size='340' side='right'caption='[[1z1y]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1z1y' size='340' side='right'caption='[[1z1y]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1z1y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemamoeba_vivax Haemamoeba vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1Y FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1z1y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1Y FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=YB:YTTERBIUM+(III)+ION'>YB</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=YB:YTTERBIUM+(III)+ION'>YB</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1y OCA], [https://pdbe.org/1z1y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1y RCSB], [https://www.ebi.ac.uk/pdbsum/1z1y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1y ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1y OCA], [https://pdbe.org/1z1y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1y RCSB], [https://www.ebi.ac.uk/pdbsum/1z1y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1y ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O96555_PLAVI O96555_PLAVI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1y_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1y_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Haemamoeba vivax]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Garboczi, D N]]
+
[[Category: Plasmodium vivax]]
-
[[Category: Klein, M M]]
+
[[Category: Garboczi DN]]
-
[[Category: Long, C A]]
+
[[Category: Klein MM]]
-
[[Category: Saul, A J]]
+
[[Category: Long CA]]
-
[[Category: Saxena, A K]]
+
[[Category: Saul AJ]]
-
[[Category: Singh, K]]
+
[[Category: Saxena AK]]
-
[[Category: Stowers, A W]]
+
[[Category: Singh K]]
-
[[Category: Su, H P]]
+
[[Category: Stowers AW]]
-
[[Category: Cell adhesion]]
+
[[Category: Su HP]]
-
[[Category: Four egf-like domain]]
+

Current revision

Crystal structure of Methylated Pvs25, an ookinete protein from Plasmodium vivax

PDB ID 1z1y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools