3k5b

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Current revision (08:00, 9 October 2024) (edit) (undo)
 
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<StructureSection load='3k5b' size='340' side='right'caption='[[3k5b]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
<StructureSection load='3k5b' size='340' side='right'caption='[[3k5b]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3k5b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K5B FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3k5b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K5B FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">55981248, TTHA1279 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8]), 55981245, atpE, TTHA1276, vatE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k5b OCA], [https://pdbe.org/3k5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k5b RCSB], [https://www.ebi.ac.uk/pdbsum/3k5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k5b ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k5b OCA], [https://pdbe.org/3k5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k5b RCSB], [https://www.ebi.ac.uk/pdbsum/3k5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k5b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/VATE_THET8 VATE_THET8]] Produces ATP from ADP in the presence of a proton gradient across the membrane.
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[https://www.uniprot.org/uniprot/Q5SIT5_THET8 Q5SIT5_THET8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/3k5b_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/3k5b_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Thet8]]
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[[Category: Thermus thermophilus HB8]]
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[[Category: Bernal, R A]]
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[[Category: Bernal RA]]
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[[Category: Donohoe, M]]
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[[Category: Donohoe M]]
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[[Category: Lee, L K]]
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[[Category: Lee LK]]
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[[Category: Stewart, A G]]
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[[Category: Stewart AG]]
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[[Category: Stock, D]]
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[[Category: Stock D]]
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[[Category: A-type atpase/synthase]]
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[[Category: Atp synthesis]]
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[[Category: Hydrogen ion transport]]
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[[Category: Hydrolase]]
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[[Category: Ion transport]]
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[[Category: Peripheral stalk]]
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[[Category: Peripheral stator]]
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[[Category: Right handed coiled coil]]
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[[Category: Transport]]
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[[Category: V-type atpase/synthase]]
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[[Category: Vacuolar atpase/synthase]]
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Current revision

Crystal structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase

PDB ID 3k5b

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