1vdp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:33, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 4: Line 4:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1vdp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VDP FirstGlance]. <br>
<table><tr><td colspan='2'>[[1vdp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VDP FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1vdq|1vdq]], [[1vds|1vds]], [[1vdt|1vdt]], [[1ved|1ved]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdp OCA], [https://pdbe.org/1vdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vdp RCSB], [https://www.ebi.ac.uk/pdbsum/1vdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdp ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdp OCA], [https://pdbe.org/1vdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vdp RCSB], [https://www.ebi.ac.uk/pdbsum/1vdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
+
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 14:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdp_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdp_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 29: Line 28:
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lysozyme]]
+
[[Category: Aibara S]]
-
[[Category: Aibara, S]]
+
[[Category: DeLucas LJ]]
-
[[Category: DeLucas, L J]]
+
[[Category: Hirose M]]
-
[[Category: Hirose, M]]
+
[[Category: Kidera A]]
-
[[Category: Kidera, A]]
+
[[Category: Shibata K]]
-
[[Category: Shibata, K]]
+
[[Category: Suzuki A]]
-
[[Category: Suzuki, A]]
+
[[Category: Yamane T]]
-
[[Category: Yamane, T]]
+
-
[[Category: Hen egg white]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Microgravity]]
+
-
[[Category: Monoclinic]]
+

Current revision

The crystal structure of the monoclinic form of hen egg white lysozyme at 1.7 angstroms resolution in space

PDB ID 1vdp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools