1ydl
From Proteopedia
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<StructureSection load='1ydl' size='340' side='right'caption='[[1ydl]], [[Resolution|resolution]] 2.30Å' scene=''> | <StructureSection load='1ydl' size='340' side='right'caption='[[1ydl]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1ydl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1ydl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YDL FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ydl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ydl OCA], [https://pdbe.org/1ydl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ydl RCSB], [https://www.ebi.ac.uk/pdbsum/1ydl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ydl ProSAT], [https://www.topsan.org/Proteins/NESGC/1ydl TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ydl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ydl OCA], [https://pdbe.org/1ydl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ydl RCSB], [https://www.ebi.ac.uk/pdbsum/1ydl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ydl ProSAT], [https://www.topsan.org/Proteins/NESGC/1ydl TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Disease == | == Disease == | ||
| - | + | [https://www.uniprot.org/uniprot/TF2H5_HUMAN TF2H5_HUMAN] Defects in GTF2H5 are a cause of trichothiodystrophy photosensitive (TTDP) [MIM:[https://omim.org/entry/601675 601675]. TTDP is an autosomal recessive disease characterized by sulfur-deficient brittle hair and nails, ichthyosis, mental retardation, impaired sexual development, abnormal facies and cutaneous photosensitivity correlated with a nucleotide excision repair (NER) defect. Neonates with trichothiodystrophy and ichthyosis are usually born with a collodion membrane. The severity of the ichthyosis after the membrane is shed is variable, ranging from a mild to severe lamellar ichthyotic phenotype. There are no reports of skin cancer associated with TTDP. | |
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/TF2H5_HUMAN TF2H5_HUMAN] Component of the TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. Necessary for the stability of the TFIIH complex and for the presence of normal levels of TFIIH in the cell.<ref>PMID:15220921</ref> | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1ydl_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1ydl_consurf.spt"</scriptWhenChecked> | ||
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Acton | + | [[Category: Acton TB]] |
| - | [[Category: Edstrom | + | [[Category: Edstrom W]] |
| - | [[Category: Forouhar | + | [[Category: Forouhar F]] |
| - | [[Category: Hunt | + | [[Category: Hunt JF]] |
| - | [[Category: Montelione | + | [[Category: Montelione GT]] |
| - | + | [[Category: Tong L]] | |
| - | [[Category: Tong | + | [[Category: Xiao R]] |
| - | [[Category: Xiao | + | |
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Current revision
Crystal Structure of the Human TFIIH, Northeast Structural Genomics Target HR2045.
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Categories: Homo sapiens | Large Structures | Acton TB | Edstrom W | Forouhar F | Hunt JF | Montelione GT | Tong L | Xiao R
