1dnm

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1dnm]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DNM FirstGlance]. <br>
<table><tr><td colspan='2'>[[1dnm]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DNM FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dnm OCA], [https://pdbe.org/1dnm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dnm RCSB], [https://www.ebi.ac.uk/pdbsum/1dnm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dnm ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dnm OCA], [https://pdbe.org/1dnm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dnm RCSB], [https://www.ebi.ac.uk/pdbsum/1dnm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dnm ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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The crystal structure of the dodecanucleotide d(CGCAAGCTGGCG) has been determined to a resolution of 2.5 A and refined to an R factor of 19.3% for 1710 reflections. The sequence crystallizes as a B-type double helix, with two G(anti).A(syn) base pairs. These are stabilized by three-center hydrogen bonds to pyrimidines that induce perturbations in base-pair geometry. The central AGCT region of the helix has a wide (greater than 6 A) minor groove.
 
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Crystal structure and sequence-dependent conformation of the A.G mispaired oligonucleotide d(CGCAAGCTGGCG).,Webster GD, Sanderson MR, Skelly JV, Neidle S, Swann PF, Li BF, Tickle IJ Proc Natl Acad Sci U S A. 1990 Sep;87(17):6693-7. PMID:2395870<ref>PMID:2395870</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 1dnm" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Li, B F]]
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[[Category: Li BF]]
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[[Category: Neidle, S]]
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[[Category: Neidle S]]
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[[Category: Sanderson, M R]]
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[[Category: Sanderson MR]]
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[[Category: Skelly, J V]]
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[[Category: Skelly JV]]
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[[Category: Swann, P F]]
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[[Category: Swann PF]]
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[[Category: Tickle, I J]]
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[[Category: Tickle IJ]]
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[[Category: Webster, G D]]
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[[Category: Webster GD]]
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[[Category: B-dna]]
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[[Category: Dna]]
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[[Category: Double helix]]
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[[Category: Mismatched]]
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Current revision

CRYSTAL STRUCTURE AND SEQUENCE-DEPENDENT CONFORMATION OF THE A.G MIS-PAIRED OLIGONUCLEOTIDE D(CGCAAGCTGGCG)

PDB ID 1dnm

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