1x46

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Current revision (13:36, 13 March 2024) (edit) (undo)
 
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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1x46]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Tokunagayusurika_akamusi Tokunagayusurika akamusi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X46 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X46 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1x46]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Tokunagayusurika_akamusi Tokunagayusurika akamusi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X46 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X46 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x46 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x46 OCA], [https://pdbe.org/1x46 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x46 RCSB], [https://www.ebi.ac.uk/pdbsum/1x46 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x46 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x46 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x46 OCA], [https://pdbe.org/1x46 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x46 RCSB], [https://www.ebi.ac.uk/pdbsum/1x46 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x46 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7M421_9DIPT Q7M421_9DIPT]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x46 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x46 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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The polymorphic components of hemoglobin (Hb) of the midge larva Propsilocerus akamusi were classified into two distinct types dependent on their spectroscopic properties, normal absorption (N) and low absorption (L). Analyses of the amino acid sequences of component VII (N-type Hb) and component V (L-type Hb) from P. akamusi indicated that one remarkable difference is the replacement of the distal histidine (His) with isoleucine (Ile) in component V. To clarify the structural differences between the two Hb components, we determined the crystal structures of components V and VII at resolutions of 1.64 A and 1.50 A, respectively. These crystal structures indicated a short additional helix comprising three amino acid residues at the C-terminal region in component V, and a typical globin fold including eight helices in component VII. Comparison of the heme regions of the Hb components suggests that the structural changes of the heme region in component V on ligation differ from that of usual Hb.
 
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Crystal structures of two hemoglobin components from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera).,Kuwada T, Hasegawa T, Sato S, Sato I, Ishikawa K, Takagi T, Shishikura F Gene. 2007 Aug 15;398(1-2):29-34. Epub 2007 May 10. PMID:17590288<ref>PMID:17590288</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 1x46" style="background-color:#fffaf0;"></div>
 
==See Also==
==See Also==
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Tokunagayusurika akamusi]]
[[Category: Tokunagayusurika akamusi]]
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[[Category: Hasegawa, T]]
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[[Category: Hasegawa T]]
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[[Category: Ishikawa, K]]
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[[Category: Ishikawa K]]
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[[Category: Kuwada, T]]
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[[Category: Kuwada T]]
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[[Category: Sato, I]]
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[[Category: Sato I]]
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[[Category: Sato, S]]
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[[Category: Sato S]]
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[[Category: Shishikura, F]]
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[[Category: Shishikura F]]
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[[Category: Takagi, T]]
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[[Category: Takagi T]]
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[[Category: Diptera]]
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[[Category: Hemoglobin]]
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[[Category: Midge larva]]
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[[Category: Oxygen storage-transport complex]]
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Current revision

Crystal structure of a hemoglobin component (TA-VII) from Tokunagayusurika akamusi

PDB ID 1x46

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