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7vrg

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'''Unreleased structure'''
 
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The entry 7vrg is ON HOLD
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==Crystal structure of chitinase-h from O. furnacalis in complex with Lynamicin B==
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<StructureSection load='7vrg' size='340' side='right'caption='[[7vrg]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7vrg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ostrinia_furnacalis Ostrinia furnacalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VRG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VRG FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7U8:methyl+4-[5,6-bis(chloranyl)-1H-indol-3-yl]-3-(5-chloranyl-1H-indol-3-yl)-1H-pyrrole-2-carboxylate'>7U8</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vrg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vrg OCA], [https://pdbe.org/7vrg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vrg RCSB], [https://www.ebi.ac.uk/pdbsum/7vrg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vrg ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q4AE59_OSTFU Q4AE59_OSTFU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Insect group h chitinase is a promising target for designing non-target safe pesticides in that it is exclusively distributed in lepidopteran insects, over 80% of which are agricultural pests. In this work, lynamicin B was discovered to be an inhibitor of OfChi-h, the group h chitinase from the lepidopteran pest Ostrinia furnacalis. Lynamicin B was revealed to competitively inhibit OfChi-h with a Ki value of 8.76 muM and does not significantly inhibit other chitinases. The co-crystal structure of lynamicin B and OfChi-h revealed that the dichloroindolyl group of lynamicin B occupies an unexplored pocket below subsites +1 and +2 of the substrate-binding cleft, which is vital for its selectivity. Feeding experiments demonstrated that lynamicin B exhibited high insecticidal activities against other lepidopteran pests Mythimna separata and Spodoptera frugiperda besides O. furnacalis. Moreover, lynamicin B did not affect Trichogramma ostriniae, a natural enemy of O. furnacalis. This study provides a natural-derived potent pesticide for the control of lepidopteran pests, leaving its natural enemy unaffected.
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Authors: Lu, Q., Liu, T., Zhou, Y., Yang, Q.
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Lynamicin B is a Potential Pesticide by Acting as a Lepidoptera-Exclusive Chitinase Inhibitor.,Lu Q, Xu L, Liu L, Zhou Y, Liu T, Song Y, Ju J, Yang Q J Agric Food Chem. 2021 Dec 1;69(47):14086-14091. doi: 10.1021/acs.jafc.1c05385. , Epub 2021 Nov 19. PMID:34797675<ref>PMID:34797675</ref>
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Description: Crystal structure of chitinase-h from O. furnacalis in complex with Lynamicin B
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Yang, Q]]
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<div class="pdbe-citations 7vrg" style="background-color:#fffaf0;"></div>
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[[Category: Zhou, Y]]
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[[Category: Lu, Q]]
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==See Also==
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[[Category: Liu, T]]
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*[[Chitinase 3D structures|Chitinase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Ostrinia furnacalis]]
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[[Category: Liu T]]
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[[Category: Lu Q]]
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[[Category: Yang Q]]
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[[Category: Zhou Y]]

Current revision

Crystal structure of chitinase-h from O. furnacalis in complex with Lynamicin B

PDB ID 7vrg

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