2d1s
From Proteopedia
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<StructureSection load='2d1s' size='340' side='right'caption='[[2d1s]], [[Resolution|resolution]] 1.30Å' scene=''> | <StructureSection load='2d1s' size='340' side='right'caption='[[2d1s]], [[Resolution|resolution]] 1.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2d1s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2d1s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Luciola_cruciata Luciola cruciata]. The June 2006 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Luciferase'' by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2006_6 10.2210/rcsb_pdb/mom_2006_6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D1S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D1S FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=SLU:5-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL]+ADENOSINE'>SLU</scene></td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d1s OCA], [https://pdbe.org/2d1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d1s RCSB], [https://www.ebi.ac.uk/pdbsum/2d1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d1s ProSAT], [https://www.topsan.org/Proteins/RSGI/2d1s TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d1s OCA], [https://pdbe.org/2d1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d1s RCSB], [https://www.ebi.ac.uk/pdbsum/2d1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d1s ProSAT], [https://www.topsan.org/Proteins/RSGI/2d1s TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/LUCI_NIPCR LUCI_NIPCR] Produces green light with a wavelength of 544 nm.[UniProtKB:Q26304] | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/2d1s_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/2d1s_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Genji firefly]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Luciferase]] | [[Category: Luciferase]] | ||
+ | [[Category: Luciola cruciata]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
- | [[Category: Hiratake | + | [[Category: Hiratake J]] |
- | [[Category: Ichiyama | + | [[Category: Ichiyama S]] |
- | [[Category: Kato | + | [[Category: Kato H]] |
- | [[Category: Kobashi | + | [[Category: Kobashi N]] |
- | [[Category: Nakatsu | + | [[Category: Nakatsu T]] |
- | + | [[Category: Sakata K]] | |
- | [[Category: Sakata | + | [[Category: Saldanha A]] |
- | [[Category: Saldanha | + | |
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Current revision
Crystal structure of the thermostable Japanese Firefly Luciferase complexed with High-energy intermediate analogue
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