2ygw

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<StructureSection load='2ygw' size='340' side='right'caption='[[2ygw]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='2ygw' size='340' side='right'caption='[[2ygw]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2ygw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YGW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YGW FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2ygw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YGW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YGW FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Malonyl-CoA_decarboxylase Malonyl-CoA decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.9 4.1.1.9] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ygw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ygw OCA], [https://pdbe.org/2ygw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ygw RCSB], [https://www.ebi.ac.uk/pdbsum/2ygw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ygw ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ygw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ygw OCA], [https://pdbe.org/2ygw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ygw RCSB], [https://www.ebi.ac.uk/pdbsum/2ygw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ygw ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
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[[https://www.uniprot.org/uniprot/DCMC_HUMAN DCMC_HUMAN]] Malonic aciduria. Defects in MLYCD are the cause of malonyl-CoA decarboxylase deficiency (MLYCD deficiency) [MIM:[https://omim.org/entry/248360 248360]]. MLYCD deficiency is an autosomal recessive disease characterized by abdominal pain, chronic constipation, episodic vomiting, metabolic acidosis and malonic aciduria.
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[https://www.uniprot.org/uniprot/DCMC_HUMAN DCMC_HUMAN] Malonic aciduria. Defects in MLYCD are the cause of malonyl-CoA decarboxylase deficiency (MLYCD deficiency) [MIM:[https://omim.org/entry/248360 248360]. MLYCD deficiency is an autosomal recessive disease characterized by abdominal pain, chronic constipation, episodic vomiting, metabolic acidosis and malonic aciduria.
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/DCMC_HUMAN DCMC_HUMAN]] Catalyzes the conversion of malonyl-CoA to acetyl-CoA. In the fatty acid biosynthesis MCD selectively removes malonyl-CoA and thus assures that methyl-malonyl-CoA is the only chain elongating substrate for fatty acid synthase and that fatty acids with multiple methyl side chains are produced. In peroxisomes it may be involved in degrading intraperoxisomal malonyl-CoA, which is generated by the peroxisomal beta-oxidation of odd chain-length dicarboxylic fatty acids.
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[https://www.uniprot.org/uniprot/DCMC_HUMAN DCMC_HUMAN] Catalyzes the conversion of malonyl-CoA to acetyl-CoA. In the fatty acid biosynthesis MCD selectively removes malonyl-CoA and thus assures that methyl-malonyl-CoA is the only chain elongating substrate for fatty acid synthase and that fatty acids with multiple methyl side chains are produced. In peroxisomes it may be involved in degrading intraperoxisomal malonyl-CoA, which is generated by the peroxisomal beta-oxidation of odd chain-length dicarboxylic fatty acids.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Malonyl-CoA decarboxylase]]
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[[Category: Allerston C]]
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[[Category: Allerston, C]]
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[[Category: Arrowsmith CH]]
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[[Category: Arrowsmith, C H]]
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[[Category: Bountra C]]
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[[Category: Bountra, C]]
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[[Category: Chaikuad A]]
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[[Category: Chaikuad, A]]
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[[Category: Edwards A]]
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[[Category: Delft, F von]]
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[[Category: Gileadi O]]
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[[Category: Edwards, A]]
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[[Category: Kavanagh K]]
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[[Category: Gileadi, O]]
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[[Category: Krojer T]]
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[[Category: Kavanagh, K]]
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[[Category: Oppermann U]]
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[[Category: Krojer, T]]
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[[Category: Puranik S]]
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[[Category: Oppermann, U]]
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[[Category: Savitsky P]]
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[[Category: Puranik, S]]
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[[Category: Vollmar M]]
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[[Category: Savitsky, P]]
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[[Category: Weigelt J]]
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[[Category: Vollmar, M]]
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[[Category: Yue WW]]
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[[Category: Weigelt, J]]
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[[Category: Von Delft F]]
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[[Category: Yue, W W]]
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[[Category: Lyase]]
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Current revision

Crystal structure of human MCD

PDB ID 2ygw

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