This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 1frn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1frn, resolution 2.0&Aring; (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=FAD:...)
Current revision (10:00, 21 November 2012) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1frn, resolution 2.0&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1frn]], [[Resolution|resolution]] 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE=
+
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>
-
|GENE=
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1frn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1frn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1frn RCSB], [http://www.ebi.ac.uk/pdbsum/1frn PDBsum]</span>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00175 NAD_binding_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0369 CysJ]</span>
+
|FUNCTION={{GO|id=GO:0050661 | text = NADP binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0004324 | text = ferredoxin-NADP+ reductase activity}}{{GO|id=GO:0050660 | text = FAD binding}}
-
|RELATEDENTRY=
+
|PROCESS={{GO|id=GO:0015979 | text = photosynthesis}}{{GO|id=GO:0006810 | text = transport}}{{GO|id=GO:0006118 | text = electron transport}}
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1frn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1frn OCA], [http://www.ebi.ac.uk/pdbsum/1frn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1frn RCSB]</span>
+
|COMPONENT={{GO|id=GO:0009579 | text = thylakoid}}{{GO|id=GO:0009507 | text = chloroplast}}{{GO|id=GO:0042651 | text = thylakoid membrane}}{{GO|id=GO:0016020 | text = membrane}}
 +
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn001 1Frn001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn002 1Frn002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015701 Ipr015701], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001709 Ipr001709], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001433 Ipr001433], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012146 Ipr012146]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00175 PF00175]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31521 d1frn_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=25631 d1frn_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00455 P00455]</span>
 +
|uPDB=1FRN|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
1frn, resolution 2.00Å ()
Ligands: , ,
Activity: Ferredoxin--NADP(+) reductase, with EC number 1.18.1.2
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1frn"
Personal tools