2ju4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:14, 30 October 2024) (edit) (undo)
 
Line 1: Line 1:
==NMR structure of the gamma subunit of cGMP phosphodiesterase==
==NMR structure of the gamma subunit of cGMP phosphodiesterase==
-
<StructureSection load='2ju4' size='340' side='right'caption='[[2ju4]], [[NMR_Ensembles_of_Models | 100 NMR models]]' scene=''>
+
<StructureSection load='2ju4' size='340' side='right'caption='[[2ju4]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ju4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bovin Bovin]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JU4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JU4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ju4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JU4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JU4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RCY:(3R)-1-OXYL-2,2,5,5-TETRAMETHYL-1,3-BIPYRROLIDINE-2,5-DIONE'>RCY</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 100 models</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PDE6G, PDEG ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 BOVIN])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RCY:(3R)-1-OXYL-2,2,5,5-TETRAMETHYL-1,3-BIPYRROLIDINE-2,5-DIONE'>RCY</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3',5'-cyclic-nucleotide_phosphodiesterase 3',5'-cyclic-nucleotide phosphodiesterase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.4.17 3.1.4.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ju4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ju4 OCA], [https://pdbe.org/2ju4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ju4 RCSB], [https://www.ebi.ac.uk/pdbsum/2ju4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ju4 ProSAT], [https://www.topsan.org/Proteins/CESG/2ju4 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ju4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ju4 OCA], [https://pdbe.org/2ju4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ju4 RCSB], [https://www.ebi.ac.uk/pdbsum/2ju4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ju4 ProSAT], [https://www.topsan.org/Proteins/CESG/2ju4 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/CNRG_BOVIN CNRG_BOVIN]] Participates in processes of transmission and amplification of the visual signal. cGMP-PDEs are the effector molecules in G-protein-mediated phototransduction in vertebrate rods and cones.
+
[https://www.uniprot.org/uniprot/CNRG_BOVIN CNRG_BOVIN] Participates in processes of transmission and amplification of the visual signal. cGMP-PDEs are the effector molecules in G-protein-mediated phototransduction in vertebrate rods and cones.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ju/2ju4_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ju/2ju4_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 3',5'-cyclic-nucleotide phosphodiesterase]]
+
[[Category: Bos taurus]]
-
[[Category: Bovin]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Guo LW]]
-
[[Category: Guo, L W]]
+
[[Category: Markley JL]]
-
[[Category: Markley, J L]]
+
[[Category: Ruoho AE]]
-
[[Category: Ruoho, A E]]
+
[[Category: Song J]]
-
[[Category: Song, J]]
+
-
[[Category: Cesg]]
+
-
[[Category: Cgmp]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Intrinsic disordered protein]]
+
-
[[Category: Paramagnetic relaxation enhancement]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Sensory transduction]]
+
-
[[Category: Vision]]
+

Current revision

NMR structure of the gamma subunit of cGMP phosphodiesterase

PDB ID 2ju4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ju4"
Personal tools