2kb3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:15, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==NMR Structure of the phosphorylated form of OdhI, pOdhI.==
==NMR Structure of the phosphorylated form of OdhI, pOdhI.==
-
<StructureSection load='2kb3' size='340' side='right'caption='[[2kb3]], [[NMR_Ensembles_of_Models | 30 NMR models]]' scene=''>
+
<StructureSection load='2kb3' size='340' side='right'caption='[[2kb3]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2kb3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_glutamicus"_kinoshita_et_al._1958 "micrococcus glutamicus" kinoshita et al. 1958]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KB3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KB3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2kb3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KB3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KB3 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 30 models</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2kb4|2kb4]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cg1630, Cgl1441, odhI ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1718 "Micrococcus glutamicus" Kinoshita et al. 1958])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kb3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kb3 OCA], [https://pdbe.org/2kb3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kb3 RCSB], [https://www.ebi.ac.uk/pdbsum/2kb3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kb3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kb3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kb3 OCA], [https://pdbe.org/2kb3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kb3 RCSB], [https://www.ebi.ac.uk/pdbsum/2kb3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kb3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ODHI_CORGL ODHI_CORGL]] An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase.
+
[https://www.uniprot.org/uniprot/ODHI_CORGL ODHI_CORGL] An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kb/2kb3_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kb/2kb3_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 34: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Micrococcus glutamicus kinoshita et al. 1958]]
+
[[Category: Corynebacterium glutamicum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Barthe, P]]
+
[[Category: Barthe P]]
-
[[Category: Canova, M]]
+
[[Category: Canova M]]
-
[[Category: Cohen-Gonsaud, M]]
+
[[Category: Cohen-Gonsaud M]]
-
[[Category: Hurard, C]]
+
[[Category: Hurard C]]
-
[[Category: Molle, V]]
+
[[Category: Molle V]]
-
[[Category: Roumestand, C]]
+
[[Category: Roumestand C]]
-
[[Category: Cytoplasm]]
+
-
[[Category: Dehydrogenase inhibitor]]
+
-
[[Category: Fha]]
+
-
[[Category: Forkhead-associated domain]]
+
-
[[Category: Gara]]
+
-
[[Category: Kinase substrate]]
+
-
[[Category: Phosphoprotein]]
+

Current revision

NMR Structure of the phosphorylated form of OdhI, pOdhI.

PDB ID 2kb3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools