7mzz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:44, 6 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==AUGbeta - FAM150A - ALKL1 60-128==
==AUGbeta - FAM150A - ALKL1 60-128==
-
<StructureSection load='7mzz' size='340' side='right'caption='[[7mzz]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='7mzz' size='340' side='right'caption='[[7mzz]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7mzz]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7MZZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7MZZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7MZZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7MZZ FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7mzx|7mzx]], [[7mzw|7mzw]], [[7mzy|7mzy]], [[7n00|7n00]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7mzz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7mzz OCA], [https://pdbe.org/7mzz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7mzz RCSB], [https://www.ebi.ac.uk/pdbsum/7mzz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7mzz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7mzz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7mzz OCA], [https://pdbe.org/7mzz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7mzz RCSB], [https://www.ebi.ac.uk/pdbsum/7mzz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7mzz ProSAT]</span></td></tr>
</table>
</table>
-
== Function ==
 
-
[[https://www.uniprot.org/uniprot/ALKL1_HUMAN ALKL1_HUMAN]] Ligand for receptor tyrosine kinase LTK and perhaps receptor tyrosine kinase ALK; activation of ALK is reported conflictingly.<ref>PMID:25331893</ref> <ref>PMID:26418745</ref> <ref>PMID:26630010</ref>
 
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Anaplastic lymphoma kinase (ALK) is a receptor tyrosine kinase (RTK) that regulates important functions in the central nervous system(1,2). The ALK gene is a hotspot for chromosomal translocation events that result in several fusion proteins that cause a variety of human malignancies(3). Somatic and germline gain-of-function mutations in ALK were identified in paediatric neuroblastoma(4-7). ALK is composed of an extracellular region (ECR), a single transmembrane helix and an intracellular tyrosine kinase domain(8,9). ALK is activated by the binding of ALKAL1 and ALKAL2 ligands(10-14) to its ECR, but the lack of structural information for the ALK-ECR or for ALKAL ligands has limited our understanding of ALK activation. Here we used cryo-electron microscopy, nuclear magnetic resonance and X-ray crystallography to determine the atomic details of human ALK dimerization and activation by ALKAL1 and ALKAL2. Our data reveal a mechanism of RTK activation that allows dimerization by either dimeric (ALKAL2) or monomeric (ALKAL1) ligands. This mechanism is underpinned by an unusual architecture of the receptor-ligand complex. The ALK-ECR undergoes a pronounced ligand-induced rearrangement and adopts an orientation parallel to the membrane surface. This orientation is further stabilized by an interaction between the ligand and the membrane. Our findings highlight the diversity in RTK oligomerization and activation mechanisms.
 
- 
-
Mechanism for the activation of the anaplastic lymphoma kinase receptor.,Reshetnyak AV, Rossi P, Myasnikov AG, Sowaileh M, Mohanty J, Nourse A, Miller DJ, Lax I, Schlessinger J, Kalodimos CG Nature. 2021 Dec;600(7887):153-157. doi: 10.1038/s41586-021-04140-8. Epub 2021, Nov 24. PMID:34819673<ref>PMID:34819673</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 7mzz" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Kalodimos, C G]]
+
[[Category: Kalodimos CG]]
-
[[Category: Reshetnyak, A V]]
+
[[Category: Reshetnyak AV]]
-
[[Category: Rossi, P]]
+
[[Category: Rossi P]]
-
[[Category: Sowaileh, M]]
+
[[Category: Sowaileh M]]
-
[[Category: Alkl2 77-152]]
+
-
[[Category: Cytokine]]
+
-
[[Category: Fam150b]]
+

Current revision

AUGbeta - FAM150A - ALKL1 60-128

PDB ID 7mzz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools