This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7nmj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:36, 1 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7nmj' size='340' side='right'caption='[[7nmj]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
<StructureSection load='7nmj' size='340' side='right'caption='[[7nmj]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7nmj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NMJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NMJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7nmj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NMJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NMJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.08&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7bmm|7bmm]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DR_0132 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243230 DEIRA])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nmj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nmj OCA], [https://pdbe.org/7nmj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nmj RCSB], [https://www.ebi.ac.uk/pdbsum/7nmj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nmj ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nmj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nmj OCA], [https://pdbe.org/7nmj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nmj RCSB], [https://www.ebi.ac.uk/pdbsum/7nmj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nmj ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9RY20_DEIRA Q9RY20_DEIRA]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Deira]]
+
[[Category: Deinococcus radiodurans R1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Romao, C]]
+
[[Category: Romao C]]
-
[[Category: Silva, S T.N]]
+
[[Category: Silva STN]]
-
[[Category: Adp]]
+
-
[[Category: Atp]]
+
-
[[Category: Kinase]]
+
-
[[Category: Polyphosphate]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of Polyphosphate Kinase 2 from Deinococcus radiodurans in complex with ADP

PDB ID 7nmj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools