7qil

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "7qil" [edit=sysop:move=sysop])
Current revision (06:17, 19 June 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 7qil is ON HOLD
+
==Solution NMR structure of halophilic DnaE intein==
 +
<StructureSection load='7qil' size='340' side='right'caption='[[7qil]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7QIL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7QIL FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7qil FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7qil OCA], [https://pdbe.org/7qil PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7qil RCSB], [https://www.ebi.ac.uk/pdbsum/7qil PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7qil ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Protein trans-splicing catalyzed by split inteins has been used for segmental isotopic labeling of proteins for alleviating the complexity of NMR signals. Whereas inteins spontaneously trigger protein splicing upon protein folding, inteins from extremely halophilic organisms require a high salinity condition to induce protein splicing. We designed and created a salt-inducible intein from the widely used DnaE intein from Nostoc punctiforme by introducing 29 mutations, which required a lower salt concentration than naturally occurring halo-obligate inteins. We determined the NMR solution structure of the engineered salt-inducible DnaE intein in 2 M NaCl, showing the essentially identical three-dimensional structure to the original one, albeit it unfolds without salts. The NMR structure of a halo-obligate intein under high salinity suggests that the stabilization of the active folded conformation is not a mere result of various intramolecular interactions but the subtle energy balance from the complex interactions, including the solvation energy, which involve waters, ions, co-solutes, and protein polypeptide chains.
-
Authors: Heikkinen, H.A., Aranko, S.A., Iwai, H.
+
The NMR structure of the engineered halophilic DnaE intein for segmental isotopic labeling using conditional protein splicing.,Heikkinen HA, Aranko AS, Iwai H J Magn Reson. 2022 Mar 18;338:107195. doi: 10.1016/j.jmr.2022.107195. PMID:35398651<ref>PMID:35398651</ref>
-
Description: Solution NMR structure of halophilic DnaE intein
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Aranko, S.A]]
+
<div class="pdbe-citations 7qil" style="background-color:#fffaf0;"></div>
-
[[Category: Iwai, H]]
+
== References ==
-
[[Category: Heikkinen, H.A]]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Aranko SA]]
 +
[[Category: Heikkinen HA]]
 +
[[Category: Iwai H]]

Current revision

Solution NMR structure of halophilic DnaE intein

PDB ID 7qil

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools