This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7oyw
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='7oyw' size='340' side='right'caption='[[7oyw]], [[Resolution|resolution]] 1.28Å' scene=''> | <StructureSection load='7oyw' size='340' side='right'caption='[[7oyw]], [[Resolution|resolution]] 1.28Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[7oyw]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OYW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OYW FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7oyw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OYW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OYW FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3IE:(2~{S})-1-methoxypropan-2-amine'>3IE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=JFN:(2R)-1-methoxypropan-2-amine'>JFN</scene>, <scene name='pdbligand=ONT:(2~{S})-1-(2-methoxyethoxy)propan-2-amine'>ONT</scene>, <scene name='pdbligand=ONW:(2~{R})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-amine'>ONW</scene>, <scene name='pdbligand=SPD:SPERMIDINE'>SPD</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.28Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3IE:(2~{S})-1-methoxypropan-2-amine'>3IE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=JFN:(2R)-1-methoxypropan-2-amine'>JFN</scene>, <scene name='pdbligand=ONT:(2~{S})-1-(2-methoxyethoxy)propan-2-amine'>ONT</scene>, <scene name='pdbligand=ONW:(2~{R})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-amine'>ONW</scene>, <scene name='pdbligand=SPD:SPERMIDINE'>SPD</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oyw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oyw OCA], [https://pdbe.org/7oyw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oyw RCSB], [https://www.ebi.ac.uk/pdbsum/7oyw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oyw ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oyw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oyw OCA], [https://pdbe.org/7oyw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oyw RCSB], [https://www.ebi.ac.uk/pdbsum/7oyw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oyw ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/POTF_ECOLI POTF_ECOLI] Required for the activity of the bacterial periplasmic transport system of putrescine. Polyamine binding protein. | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 22: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Escherichia coli]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Hocker | + | [[Category: Hocker B]] |
| - | [[Category: Kroeger | + | [[Category: Kroeger P]] |
| - | [[Category: Shanmugaratnam | + | [[Category: Shanmugaratnam S]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D F88L S247D in complex with spermidine
| |||||||||||
