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3avy

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Current revision (15:58, 4 October 2023) (edit) (undo)
 
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<StructureSection load='3avy' size='340' side='right'caption='[[3avy]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
<StructureSection load='3avy' size='340' side='right'caption='[[3avy]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3avy]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AVY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3avy]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7], [https://en.wikipedia.org/wiki/Escherichia_virus_Qbeta Escherichia virus Qbeta] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AVY FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CH1:3-DEOXY-CYTIDINE-5-TRIPHOSPHATE'>CH1</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.616&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3avt|3avt]], [[3avu|3avu]], [[3avv|3avv]], [[3avw|3avw]], [[3avx|3avx]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CH1:3-DEOXY-CYTIDINE-5-TRIPHOSPHATE'>CH1</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3avy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3avy OCA], [https://pdbe.org/3avy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3avy RCSB], [https://www.ebi.ac.uk/pdbsum/3avy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3avy ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3avy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3avy OCA], [https://pdbe.org/3avy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3avy RCSB], [https://www.ebi.ac.uk/pdbsum/3avy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3avy ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/EFTS_ECO57 EFTS_ECO57]] Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity).
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[https://www.uniprot.org/uniprot/EFTU_ECO57 EFTU_ECO57] [https://www.uniprot.org/uniprot/EFTS_ECO57 EFTS_ECO57] Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity).[https://www.uniprot.org/uniprot/RDRP_BPQBE RDRP_BPQBE] This enzyme is part of the viral RNA-dependent RNA polymerase complex.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Escherichia coli O157:H7]]
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[[Category: Escherichia virus Qbeta]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Takeshita, D]]
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[[Category: Synthetic construct]]
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[[Category: Tomita, K]]
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[[Category: Takeshita D]]
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[[Category: Rna polymerase]]
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[[Category: Tomita K]]
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[[Category: Transferase-rna complex]]
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[[Category: Translation]]
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Current revision

Structure of viral RNA polymerase complex 6

PDB ID 3avy

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