2gw3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:05, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2gw3' size='340' side='right'caption='[[2gw3]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='2gw3' size='340' side='right'caption='[[2gw3]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2gw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Open_brain_coral Open brain coral]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GW3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2gw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trachyphyllia_geoffroyi Trachyphyllia geoffroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GW3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR8:2-[1-AMINO-2-(1H-IMIDAZOL-5-YL)ETHYL]-1-(CARBOXYMETHYL)-4-[(4-OXOCYCLOHEXA-2,5-DIEN-1-YLIDENE)METHYL]-1H-IMIDAZOL-5-OLATE'>CR8</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR8:2-[1-AMINO-2-(1H-IMIDAZOL-5-YL)ETHYL]-1-(CARBOXYMETHYL)-4-[(4-OXOCYCLOHEXA-2,5-DIEN-1-YLIDENE)METHYL]-1H-IMIDAZOL-5-OLATE'>CR8</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2gw4|2gw4]]</div></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gw3 OCA], [https://pdbe.org/2gw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gw3 RCSB], [https://www.ebi.ac.uk/pdbsum/2gw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gw3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gw3 OCA], [https://pdbe.org/2gw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gw3 RCSB], [https://www.ebi.ac.uk/pdbsum/2gw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gw3 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8I6J8_TRAGO Q8I6J8_TRAGO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/2gw3_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/2gw3_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 36: Line 37:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Open brain coral]]
+
[[Category: Trachyphyllia geoffroyi]]
-
[[Category: Hayashi, I]]
+
[[Category: Hayashi I]]
-
[[Category: Ikura, M]]
+
[[Category: Ikura M]]
-
[[Category: Miyawaki, A]]
+
[[Category: Miyawaki A]]
-
[[Category: Mizuno, H]]
+
[[Category: Mizuno H]]
-
[[Category: Beta barrel]]
+
-
[[Category: Luminescent protein]]
+

Current revision

Crystal structure of stony coral fluorescent protein Kaede, green form

PDB ID 2gw3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2gw3"
Personal tools