2w0c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:06, 9 May 2024) (edit) (undo)
 
Line 3: Line 3:
<SX load='2w0c' size='340' side='right' viewer='molstar' caption='[[2w0c]], [[Resolution|resolution]] 7.00&Aring;' scene=''>
<SX load='2w0c' size='340' side='right' viewer='molstar' caption='[[2w0c]], [[Resolution|resolution]] 7.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2w0c]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Alteromonas_phage_pm2 Alteromonas phage pm2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W0C FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2w0c]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudoalteromonas_virus_PM2 Pseudoalteromonas virus PM2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W0C FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 7&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2vvf|2vvf]], [[2vvd|2vvd]], [[2vve|2vve]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w0c OCA], [https://pdbe.org/2w0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w0c RCSB], [https://www.ebi.ac.uk/pdbsum/2w0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w0c ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w0c OCA], [https://pdbe.org/2w0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w0c RCSB], [https://www.ebi.ac.uk/pdbsum/2w0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w0c ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/CAPSD_BPPM2 CAPSD_BPPM2]] Major capsid protein. [[https://www.uniprot.org/uniprot/SPIKE_BPPM2 SPIKE_BPPM2]] Receptor binding protein located at the fivefold vertices.
+
[https://www.uniprot.org/uniprot/CAPSD_BPPM2 CAPSD_BPPM2] Major capsid protein.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 33: Line 33:
__TOC__
__TOC__
</SX>
</SX>
-
[[Category: Alteromonas phage pm2]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Abrescia, N G.A]]
+
[[Category: Pseudoalteromonas virus PM2]]
-
[[Category: Assenberg, R]]
+
[[Category: Abrescia NGA]]
-
[[Category: Bamford, D H]]
+
[[Category: Assenberg R]]
-
[[Category: Bamford, J K.H]]
+
[[Category: Bamford DH]]
-
[[Category: Butcher, S J]]
+
[[Category: Bamford JKH]]
-
[[Category: Grimes, J M]]
+
[[Category: Butcher SJ]]
-
[[Category: Kivela, H M]]
+
[[Category: Grimes JM]]
-
[[Category: Stuart, D I]]
+
[[Category: Kivela HM]]
-
[[Category: Sutton, G C]]
+
[[Category: Stuart DI]]
-
[[Category: Capsid protein]]
+
[[Category: Sutton GC]]
-
[[Category: Member of prd1-adeno viral lineage]]
+
-
[[Category: Membrane]]
+
-
[[Category: Membrane-containing bacteriophage]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Virus]]
+
-
[[Category: Virus virion]]
+

Current revision

X-ray structure of the entire lipid-containing bacteriophage PM2

2w0c, resolution 7.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools